Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 264 2e-65 seq2 147 4e-30 >seq1 Length=2936865 Score = 264 bits (292), Expect = 2e-65 Identities = 535/791 (68%), Gaps = 22/791 (3%) Strand=Plus/Minus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650 ||||||||| |||||||| || ||| ||| ||||| | || | | | || |||| Sbjct 2540215 CATAAAATCGAATGGATTAGTGACATTGTAAACTTTTT-TATTACCCAAAGCAACCAATA 2540157 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 2540156 ATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAATAAAC 2540097 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 ||| |||||| |||||| || ||||||||||| ||||| ||||||| |||| || Sbjct 2540096 TAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAAT-- 2540039 Query 49771 taattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCAA 49830 | || | || ||| ||| | ||| | || || ||| ||| ||||||||||| Sbjct 2540038 TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTA-AATGGGCAAATAATAAACATGCAA 2539980 Query 49831 AATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCA 49890 | ||||| |||||||| ||||| | | | || ||||| || |||||||||||||||| Sbjct 2539979 AGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTGGCA 2539920 Query 49891 TTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAATATAC 49947 | || ||||| || || | ||| || || ||||||| ||| ||| |||| || |||| Sbjct 2539919 TCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT-GAAA--AAGATAC 2539863 Query 49948 CCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCC 50007 | || ||| || || || | | ||| | |||||| | | |||| |||| Sbjct 2539862 CTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGGATCC 2539803 Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 50067 | | || |||||||| || || ||||| || || || |||| ||||| || |||| Sbjct 2539802 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGAATA 2539743 Query 50068 ATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAG 50127 | | ||| | || ||||| || || |||| | Sbjct 2539742 AGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGTTTCTG 2539683 Query 50128 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTGAA 50187 | || | |||||| ||||| ||| || || | | ||||||| | |||| Sbjct 2539682 AGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTTGAA 2539623 Query 50188 CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGA 50247 |||| | | || ||| || || |||||| ||||||||||| ||||| || |||| Sbjct 2539622 CTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGCAAAGA 2539563 Query 50248 ATGCTAAAACGTATT----TAATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCAA 50300 | || || | | || ||| ||| | ||||||||| ||||| ||||| |||| Sbjct 2539562 AAGCCAAGA-TTCTTCCGATAAAGAAACG---TTCATTATCGTTTAATTTTTCTCTCCAA 2539507 Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360 | |||||| || |||||| | |||||| |||||| ||||| || | | ||| Sbjct 2539506 TCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTTTC 2539447 Query 50361 TTATACATTTG 50371 || |||||||| Sbjct 2539446 TTGTACATTTG 2539436 >seq2 Length=2433673 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || ||||||| ||||| ||| || || || || Sbjct 21216 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCGGA 21157 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| | || || |||||||||||||||||||| ||||| ||||| || ||||| Sbjct 21156 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 21097 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || ||||| ||||| || ||| || ||||| |||| || || ||||| || Sbjct 21096 AATACCCTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCAAC 21037 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| | ||| || || ||||| ||||| ||||| | || || |||||||| Sbjct 21036 TTCCAAAGTGATAGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTTT 20986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479899090800