Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 264 2e-65
seq2 147 4e-30
>seq1
Length=2936865
Score = 264 bits (292), Expect = 2e-65
Identities = 535/791 (68%), Gaps = 22/791 (3%)
Strand=Plus/Minus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650
||||||||| |||||||| || ||| ||| ||||| | || | | | || ||||
Sbjct 2540215 CATAAAATCGAATGGATTAGTGACATTGTAAACTTTTT-TATTACCCAAAGCAACCAATA 2540157
Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710
||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2540156 ATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAATAAAC 2540097
Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770
||| |||||| |||||| || ||||||||||| ||||| ||||||| |||| ||
Sbjct 2540096 TAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAAT-- 2540039
Query 49771 taattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCAA 49830
| || | || ||| ||| | ||| | || || ||| ||| |||||||||||
Sbjct 2540038 TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTA-AATGGGCAAATAATAAACATGCAA 2539980
Query 49831 AATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCA 49890
| ||||| |||||||| ||||| | | | || ||||| || ||||||||||||||||
Sbjct 2539979 AGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTGGCA 2539920
Query 49891 TTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAATATAC 49947
| || ||||| || || | ||| || || ||||||| ||| ||| |||| || ||||
Sbjct 2539919 TCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT-GAAA--AAGATAC 2539863
Query 49948 CCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCC 50007
| || ||| || || || | | ||| | |||||| | | |||| ||||
Sbjct 2539862 CTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGGATCC 2539803
Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 50067
| | || |||||||| || || ||||| || || || |||| ||||| || ||||
Sbjct 2539802 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGAATA 2539743
Query 50068 ATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAG 50127
| | ||| | || ||||| || || |||| |
Sbjct 2539742 AGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAATAATGAGTAAGTTTCTG 2539683
Query 50128 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTGAA 50187
| || | |||||| ||||| ||| || || | | ||||||| | ||||
Sbjct 2539682 AGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTTGAA 2539623
Query 50188 CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGA 50247
|||| | | || ||| || || |||||| ||||||||||| ||||| || ||||
Sbjct 2539622 CTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCGGATGCGGCAAAGA 2539563
Query 50248 ATGCTAAAACGTATT----TAATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCAA 50300
| || || | | || ||| ||| | ||||||||| ||||| ||||| ||||
Sbjct 2539562 AAGCCAAGA-TTCTTCCGATAAAGAAACG---TTCATTATCGTTTAATTTTTCTCTCCAA 2539507
Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360
| |||||| || |||||| | |||||| |||||| ||||| || | | |||
Sbjct 2539506 TCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCTTTC 2539447
Query 50361 TTATACATTTG 50371
|| ||||||||
Sbjct 2539446 TTGTACATTTG 2539436
>seq2
Length=2433673
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || ||||||| ||||| ||| || || || ||
Sbjct 21216 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCGGA 21157
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| | || || |||||||||||||||||||| ||||| ||||| || |||||
Sbjct 21156 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 21097
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || ||||| ||||| || ||| || ||||| |||| || || ||||| ||
Sbjct 21096 AATACCCTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCAAC 21037
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | ||| || || ||||| ||||| ||||| | || || ||||||||
Sbjct 21036 TTCCAAAGTGATAGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTTT 20986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479899090800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |