Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1 266 6e-66
seq2 156 8e-33
>seq1
Length=2936865
Score = 266 bits (294), Expect = 6e-66
Identities = 390/544 (72%), Gaps = 11/544 (2%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
|||||| || ||||||||| | ||||| || || || || || || | || || ||
Sbjct 2540278 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAAATGTT 2540219
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949
| ||||||||| |||||||| || ||| ||| ||||| | || | | | || |
Sbjct 2540218 TTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTT-TATTACCCAAAGCAACCA 2540160
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 2540159 ATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCCAATA 2540100
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
| ||| |||||| |||||| || ||||||||||| ||||| ||||||| |||| |
Sbjct 2540099 AACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAA 2540040
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
| | || | || ||| ||| | ||| | || || ||| ||| ||||||||
Sbjct 2540039 T--TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTA-AATGGGCAAATAATAAACATG 2539983
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
|||| || || |||||||||||||| | | | || ||||| || |||||||||||||
Sbjct 2539982 CAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTG 2539923
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAATA 39246
|||| || ||||| || || | ||| || || ||||||| ||| ||| |||| || |
Sbjct 2539922 GCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT-GAAA--AAGA 2539866
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
|||| || ||| || || || | | ||| | |||||| | | |||| |
Sbjct 2539865 TACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCCTCGGAATCTTGGA 2539806
Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366
|||| | ||||||||||| || || ||||| || || || |||| ||||| || |
Sbjct 2539805 TCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAGCATTGA 2539746
Query 39367 ATAA 39370
||||
Sbjct 2539745 ATAA 2539742
>seq2
Length=2433673
Score = 156 bits (172), Expect = 8e-33
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || ||||||| ||||| || ||
Sbjct 21224 TTCTTACCACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTG 21165
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || ||||| | || |||| || ||||||||||||||||| || ||||| ||||||
Sbjct 21164 TAGTCGGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGG 21105
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| ||||| || || ||||| ||||| || ||| || ||||| ||||| || ||
Sbjct 21104 TCTGGTGGAATACCCTCTTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAG 21045
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| | ||| || || ||||| ||||| ||||| | ||| || ||||||||
Sbjct 21044 GATTCAACTTCCAAAGTGATAGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTTT 20986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135909486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |