Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 8e-35
seq4 109 2e-18
seq2 89.7 2e-12
>seq1
Length=2936865
Score = 163 bits (180), Expect = 8e-35
Identities = 429/650 (66%), Gaps = 21/650 (3%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||| ||||| |||| ||| ||| ||||| | |||||||||||||||||
Sbjct 2416585 GTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGGTT 2416644
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || |||||||||||||||| || | ||| ||||||| || || || | || ||
Sbjct 2416645 GGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGC 2416704
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807
|||| || ||| | | | || || || | || || || | ||||||
Sbjct 2416705 TTCCAAGATGGAGTACCACAACTTTTGAGCCTTGAT--GGTTTTTCTACCACGACCTTCC 2416762
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAG 155865
|||||||| |||| | || || || ||||| ||| || || ||| |
Sbjct 2416763 CTTTCATATTTTTCGTACAAC--TCAACAAACTCGTCACCATAAGTGTCGGCCAATCCTG 2416820
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAA-----ATTTTATTACCGATTACACGCTCCAT 155920
| | || || | |||| | ||| ||||| || || | || |||
Sbjct 2416821 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCA-----ACTCTCTTCAT 2416875
Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980
||| | ||| ||| | || ||| | || || || | || || | ||
Sbjct 2416876 AAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACC 2416935
Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040
||| ||||| | | ||| | ||| || |||||| || ||| || |||||||
Sbjct 2416936 GTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAA 2416995
Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097
||||||| |||| |||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 2416996 AGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAA 2417055
Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157
|||| | |||||| ||||||||||| ||||| || || || || ||||| | |||
Sbjct 2417056 AACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACC 2417115
Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGC 156217
|| || |||| || ||||| || | ||||||||||| | | || |||||| |||
Sbjct 2417116 AGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGC 2417175
Query 156218 GCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTG 156267
|| |||| || | ||||||||||||||||||| |||| |||||
Sbjct 2417176 ACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTG 2417225
Score = 118 bits (130), Expect = 3e-21
Identities = 236/345 (68%), Gaps = 5/345 (1%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
||||| ||||| | ||| ||||| | ||||||||||||| | || || | ||||
Sbjct 2719316 TCTAAGATATCAGGTCTATTTGTACCGGCCAATACAACAACATGGTCAGTACTGTCAAAT 2719375
Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTT 289002
|| ||||| || | |||||| | ||| ||| || ||||| || | ||| ||
Sbjct 2719376 CCGTCCATTTCAACCAATAATTGATTCAATGTAGTTTCTCTCTCATCGTTGGCGCCTGTT 2719435
Query 289003 GAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACA 289062
| || ||| | | || ||| ||||||| ||||||||||| |||| || | |
Sbjct 2719436 GCATTTCCCT--TTGATC-TTTGCTTACCAATTGCATCAATTTCATCAACAAACACAATC 2719492
Query 289063 CACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCA 289122
| |||| ||||| ||| ||| || || || || | |||||| || || || | ||||
Sbjct 2719493 GATGGAGCATTTTCTCTTGCAGTTTTGAACAAATCACGTACACGTGAGGCACCTACACCA 2719552
Query 289123 ACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCC 289181
||| ||||||| |||||||| ||| | || || |||| || | ||| ||||| ||
Sbjct 2719553 ACAAACATTTCAACAAATTCCGAACCAGAAAC-AGAATAAAACGGAACACCAGCTTCACC 2719611
Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
||| || | || || | ||| ||||||||||| || || ||
Sbjct 2719612 AGCTGTGGCTTTAGCGAGTAATGTTTTACCTGTTCCCGGAGGACC 2719656
>seq4
Length=1591921
Score = 109 bits (120), Expect = 2e-18
Identities = 210/304 (69%), Gaps = 8/304 (3%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
|||||| ||||||| | ||||| |||||||| || |||||||| ||| | || ||
Sbjct 14160 CATAATATCTTCCAAAGCCTTGACCAAACGACGTTGGATATAACCCGTTTCTGCAGTCTT 14219
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| |||||||| ||||| | | |||| |||| ||||||||||| | ||||| ||
Sbjct 14220 AACAGCAGTATCAATAAGACCTTCTCTACCAGCCATTGCATGGAAGAAAAACTCTTGTGG 14279
Query 302685 TCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCG 302742
||| | || | ||| | | ||| | ||||| ||||| | ||||| |||| ||
Sbjct 14280 -CGTTAAACCTCTCAA-ATAAGAGTTTTCAACAAAACCCTTTGATTCGGGGGAATAATCA 14337
Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802
||||| || || |||| | | || || | || | || || | ||||| ||
Sbjct 14338 TCTTTGGTGAAATGAGGCAATGAACGGTCAGCAAAACCAAAAGGAATTCTTTTTCCTTCG 14397
Query 302803 ACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGG 302860
||| | ||||| || | || | |||||||||||| || ||||| | |||||||
Sbjct 14398 ACGATTTGCTGACCGACACATGCCGACATCTGCGAAATGTTGATAAATGA--ACCCTTGG 14455
Query 302861 AGCC 302864
| ||
Sbjct 14456 AACC 14459
Score = 96.9 bits (106), Expect = 1e-14
Identities = 236/355 (66%), Gaps = 6/355 (2%)
Strand=Plus/Plus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| |||||| | ||||||||||| |||| ||||| | |||| | | |||
Sbjct 1370570 CTTTCTTTACCGATGGCATCAATTTCATCAACAAAAATGATTGCTGGAGCCATATCTCTT 1370629
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| | || || || | |||||| ||||| |||| ||||||| ||||||| || |||
Sbjct 1370630 GCTGTCTTGAACAAATCACGTACACGAGATGCACCAACACCAACAAACATTTCAACGAAT 1370689
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|| ||| |||| || || ||||| |||| ||||| || || || | || |
Sbjct 1370690 TCTGAACCGGAAACACTAAGGAATGGTACACCAGCTTCACCGGCAGTGGCTTTAGCTAAC 1370749
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260
| ||||||||||| || || |||||| ||| | | || || | ||| || ||
Sbjct 1370750 AAGGTCTTACCTGTACCCGGAGGTCCCGATAAGATTGCACCACGAGGAATTTTGGCACC- 1370808
Query 289261 GCAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATT 289318
|| || ||| |||| |||| || || || | |||| |||| | ||| | |
Sbjct 1370809 -CAATTTTTCATACTTCTTAGGGTCCTGCAAGAACTTGACAAATTCCATGATTTCTTCCT 1370867
Query 289319 TTGCCTCATCACATCCTGCTACATCAGCAAAAGTAATATTAATATCG--TTCTTG 289371
||| |||||||| || || ||||| || | || |||| |||| ||||||
Sbjct 1370868 TTGATTCATCACACCCAGCAACATCCTTGAACTTTATCTTAACATCGGTTTCTTG 1370922
Score = 93.3 bits (102), Expect = 1e-13
Identities = 115/154 (75%), Gaps = 5/154 (3%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||||| || | |||||||| ||| || || ||| || | ||||||||| |
Sbjct 13392 AATTTCTTTAAGTCTTGGAACACCCAAGGTGACATT---CTTTGAAGAGACACCAGCATA 13448
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
||||| ||||||| || | |||||||| |||||||||||| ||| || |||| |
Sbjct 13449 ATGGAATGTATTCAACGTCATTTGAGTAGCTGGCTCACCAATGGATTGAGCAGCAACAAC 13508
Query 301935 ACCAACCATTTCTCC-TGGTGCTACAATAGACTT 301967
|||||||||||| || ||||| ||||| || ||
Sbjct 13509 ACCAACCATTTCACCAGGGTGC-ACAATCGATTT 13541
>seq2
Length=2433673
Score = 89.7 bits (98), Expect = 2e-12
Identities = 216/322 (67%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| |||||| | ||| |||||||| || | || || |||| ||| || | ||
Sbjct 89060 CCAATAGCATCCAATTCATCAATGAATATAATTGCTGGTGATTTTTCTCTAGCTTGTCCA 89119
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
||||||||||| | | || |||| ||||||||||| ||| ||||||||||| |
Sbjct 89120 AATAATTCTCTAATTCTCTTGGCACCAACACCAACATACAATTCATCAAATTCAGAACCA 89179
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
|| | | || | || || || || || ||| || |||| | || |||
Sbjct 89180 GACATAAAGAAAAAGGGGACTCCAGCCTCACCAGCAGTTGCTCTTGCCAACAAGGTTTTA 89239
Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACTT 289268
|| || || || || || || | ||| ||||| || | ||| | |||| | |
Sbjct 89240 CCAGTACCTGGAGGGCCTGTCAACAAAACACCCTTGGGCAATTTACCACCCAAACCAGTG 89299
Query 289269 ATATTTCTCAGGGCTCTTT-AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
| ||||| | || ||||| ||||| || ||||||||||| | |||| | |||| ||||
Sbjct 89300 A-ATTTC-GAAGGATCTTTCAAAAAATCAACAATTTCCTCCAATTCAGCTCTTGCTTCAT 89357
Query 289328 CACATCCTGCTACATCAGCAAA 289349
|||| ||| ||||| | |||
Sbjct 89358 CACAACCTTGAACATCGGAAAA 89379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |