Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq1 89.7 5e-13 >seq2 Length=2433673 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| |||||||||| ||||| || | ||||| ||| || || Sbjct 20989 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 21048 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||||| || || || || || ||| Sbjct 21049 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCAA 21108 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || ||||| | || || |||| | | || || || ||| Sbjct 21109 CAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAAC 21168 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||| ||||| || | |||||||||||| ||||| | || || || Sbjct 21169 ATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTGG 21218 >seq1 Length=2936865 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 |||| ||||||||| || ||||| | |||||| ||| ||||| ||||||| | Sbjct 2539839 TGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCT 2539898 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 | |||| || ||| | ||||| || |||| ||| |||||| || |||| ||||| Sbjct 2539899 GGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTG 2539958 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGT 126177 ||||||| | || || |||||||||||| Sbjct 2539959 ACGAAGGTTTACACACTGACTTTGCATGT 2539987 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 |||||| || | ||| || || || |||||||| || | ||||||||||||||| Sbjct 2416543 AATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACA 2416602 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 |||||| || | | ||||| |||||||||| | || ||| || ||||||||| Sbjct 2416603 ACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGGTTGGACTTGGTGTTACAAGC 2416662 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 ||| || || | ||| | || || |||||||| Sbjct 2416663 ATCCTTATACAACATGAATGGGGTACCAGTTTC 2416695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240