Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 3e-28
seq1 89.7 5e-13
>seq2
Length=2433673
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| |||||||||| ||||| || | ||||| ||| || ||
Sbjct 20989 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 21048
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || || || || |||
Sbjct 21049 GACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCAA 21108
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||||||||| || ||||| | || || |||| | | || || || |||
Sbjct 21109 CAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAAC 21168
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| ||||| ||||| || | |||||||||||| ||||| | || || ||
Sbjct 21169 ATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTGG 21218
>seq1
Length=2936865
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088
|||| ||||||||| || ||||| | |||||| ||| ||||| ||||||| |
Sbjct 2539839 TGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCT 2539898
Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148
| |||| || ||| | ||||| || |||| ||| |||||| || |||| |||||
Sbjct 2539899 GGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTG 2539958
Query 126149 ACGAAGGACTCCATACGGACTTTGCATGT 126177
||||||| | || || ||||||||||||
Sbjct 2539959 ACGAAGGTTTACACACTGACTTTGCATGT 2539987
Score = 82.4 bits (90), Expect = 7e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139
|||||| || | ||| || || || |||||||| || | |||||||||||||||
Sbjct 2416543 AATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACA 2416602
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199
|||||| || | | ||||| |||||||||| | || ||| || |||||||||
Sbjct 2416603 ACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCTGGTTGGACTTGGTGTTACAAGC 2416662
Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
||| || || | ||| | || || ||||||||
Sbjct 2416663 ATCCTTATACAACATGAATGGGGTACCAGTTTC 2416695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897555010240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |