Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 228 2e-54
seq4 156 1e-32
seq7 111 4e-19
>seq1
Length=2936865
Score = 228 bits (252), Expect = 2e-54
Identities = 579/868 (67%), Gaps = 17/868 (2%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||||||||||||||||||| | ||| | | ||||| | ||| ||||||| | |
Sbjct 2417459 ACTATTTTGGTTTCAAAACTTTAGAAAGATCATATTTGTTACGTATCAATGGTAAAGTAG 2417400
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|||| | || || || || || | | ||||| || ||||| |||||| |||||
Sbjct 2417399 CTGAAAGACCACAGCATTTGATTATGAGAGTTGCTATCGGTATACATGGAAGAGATATCC 2417340
Query 110422 AAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480
| || |||||| |||| | | || | ||| | | || ||||| | |||||
Sbjct 2417339 CAAGAGTCATTGAAACTTATAACTTGATGTCGCAAAGATACTT-TACTCATGGTTCTCCT 2417281
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAAT 110539
| ||||| || || ||| | |||| || | ||||| |||||| | | |||
Sbjct 2417280 TGTTTGTTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAAT 2417222
Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTC 110596
|| || ||||||||||||||||||||||| | |||||| |||| ||| | |||||
Sbjct 2417221 GAAAGAAGATTCTATTGAAGGTATTTATGACAC-CTTAAA--AACTTGTGCTTTAATTTC 2417165
Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656
|| | |||| || |||||| | ||| |||| | ||||| || | || || ||||
Sbjct 2417164 AAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCCACTGGTGCTTATAT 2417105
Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716
|| | || ||| |||| | ||| || | || ||| | | || |||||| ||||
Sbjct 2417104 TGCTGGTACAAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACAC 2417045
Query 110717 TGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGA 110773
||| ||||| ||||||||||| |||||| ||| | |||||| | ||||| ||
Sbjct 2417044 TGCCCGTTATGTTGATCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCTTTGTATCTTGA 2416985
Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833
||| ||||| ||||| ||||| ||| | || | | || || || || |||||
Sbjct 2416984 ACCATGGCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGA 2416925
Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893
| ||||| | |||||||| || |||||||| ||||||| || ||||| | ||
Sbjct 2416924 AATTAGAGCTAGAGATTTATTCCCGGCCTTGTGGATTCCAGATTTGTTTATGAAGAGAGT 2416865
Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953
| || ||||||| |||| | | | | ||| || |||| || | | ||
Sbjct 2416864 TGAACAAAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCCGACAC 2416805
Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCA 111012
||||| | ||||||| || | |||||||||||||||| ||||| | | | |
Sbjct 2416804 TTATGGTGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAA 2416745
Query 111013 AACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071
||| | || | |||||| | | |||| | ||| | ||| | ||| ||||||||
Sbjct 2416744 AACCA--TCAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGT 2416687
Query 111072 ACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGA 111131
|| || | || |||||||| ||| | ||| ||| || || || | |||||||||
Sbjct 2416686 ACCCCATTCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAGAAGAATTTAGGT 2416627
Query 111132 ACAATTAAGTCTAGTAATTTGTGCTGTG 111159
| || || ||| || ||||| ||||
Sbjct 2416626 ATTATCAAATCTTCCAACTTGTGTTGTG 2416599
Score = 141 bits (156), Expect = 2e-28
Identities = 480/732 (66%), Gaps = 27/732 (4%)
Strand=Plus/Plus
Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524
||||| |||||| ||| || | |||||||| | |||||| |||||| | ||||||
Sbjct 2539439 ATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGAT 2539498
Query 131525 ATTGATGATTGG---GAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGT-TCT 131580
|| |||||||| |||||||||| | |||||| | || | | || ||| |||
Sbjct 2539499 CTTCATGATTGGAGAGAAAAATTAAACGATAATGAAC--GTTTCTTTATCGGAAGAATCT 2539556
Query 131581 TG-CATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTC 131639
|| | ||||| |||| | ||||| ||||||| ||| || | || || || |||
Sbjct 2539557 TGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAAACTT--TTC 2539614
Query 131640 AA--GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATC 131697
| ||| || | ||||| |||| | ||| |||||| ||| ||| | |||
Sbjct 2539615 AGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAA 2539674
Query 131698 TATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAA 131757
||||| || | || |||||||||||||| | | | | || || | | ||
Sbjct 2539675 CATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGATCCAAAAGAAGC 2539734
Query 131758 AAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGC 131817
| ||||| ||||| | | | |||| |||||||||||| || || |||||
Sbjct 2539735 TGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGCTGATTGGGC 2539794
Query 131818 TATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACA---AGACTTGTAGCTTTTGC 131874
|| | |||||| |||||| |||| || | | | ||| | || ||||| ||
Sbjct 2539795 CATCAGATGGATCCAAGAT---TCCGAGGCATTGTTTGCCGAGAGATTGGTTGCTTTCGC 2539851
Query 131875 TTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG---CTATCTTTTGGCTTAAGAA 131931
| |||||||||||| | |||||| ||| || | || |||| || ||| | |||||
Sbjct 2539852 TGCTGTTGAAGGTATCT--TTTTCA-GTGGTTCATTTGCATCTATTTTCTGGTTGAAGAA 2539908
Query 131932 GCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATT 131991
| || |||||||| ||| | | || ||||| |||| || | | || |||| ||
Sbjct 2539909 AAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGGTTT 2539968
Query 131992 GCATACTGAATTTGCTATATTAATCTATAGAAAATTTGC-TGATAAACTTGATGAAAATA 132050
|| ||||| ||||| || || || | | |||| | ||| || ||| ||| |
Sbjct 2539969 ACACACTGACTTTGC-ATGTTTATTATTTGCCCATTTACAACATAGACCAGATCCAAAGA 2540027
Query 132051 ATATTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTT 132110
|| || | |||| | ||||| ||||| || || || || || |||| || ||||
Sbjct 2540028 TCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTT 2540087
Query 132111 TGCCTTGCAATTTGATTGGG-ATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTT 132169
| || | | || |||||| |||||| | | | ||| | || ||||||| |||
Sbjct 2540088 TACC-AGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTT 2540146
Query 132170 GCTGATCGTTTA 132181
|||||| | |||
Sbjct 2540147 GCTGATAGATTA 2540158
>seq4
Length=1591921
Score = 156 bits (172), Expect = 1e-32
Identities = 435/654 (67%), Gaps = 25/654 (4%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAA 110578
||||| |||||| |||| ||| || |||||||| ||||| || || ||| | | ||| |
Sbjct 906894 TCTTG-TTTCTTGCTAGCAATGAAGGATGATTCCATTGATGGAATCTATCAAACACTTCA 906952
Query 110579 AGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG 110638
||| | || | ||||| ||| ||||| || ||||| || || |||| |||| |
Sbjct 906953 CGAAGCAGCCTTGATTTCCAAAGCTTCTGGTGGGATTGGGATCCATATTCACAATATCAG 907012
Query 110639 CTCAAAAGGA--GCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATG 110696
| ||||| ||| || | | | | | ||| | | | ||| | ||||| |||
Sbjct 907013 AGCGCAAGGATCGCACAT-TAGTAGTACTAATGGGAGAT-CTGGTGGGGTAGTTCCCATG 907070
Query 110697 TTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGC 110753
|| | || |||||| |||| ||| |||||| | ||||| || || ||| ||
Sbjct 907071 TTGCGCGTTTTCAACAACACCGCACGATATGTTGACCAAGGCGGAGGAAAAAGACCAGGA 907130
Query 110754 TCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT 110813
||||||| |||||| | |||||||||||| | || || ||||| | || | | |
Sbjct 907131 GCATTTGCAATCTATATGGAACCTTGGCATGCTGACATCTTTGACATTTTGAATATGAGG 907190
Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873
|||||||| || |||||||| || | | ||||| || |||| | |||||| ||
Sbjct 907191 AAAAATCACGGCAATGAAGAACTTCGAACTAGAGATTTGTTCTATGGGTTATGGATTCCA 907250
Query 110874 GATTTATTCATGAAACGTGTTCA---AGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT 110930
||||| |||||| || | || | || | ||| || ||||| | | | ||| ||
Sbjct 907251 GATTTGTTCATGCAAAGAGTGAAATCAGGAGATG--AT-TGGTCGTTATTCTCTCCCGAT 907307
Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATAT 110990
| || || | |||||| ||||| | ||||| | | | ||||| ||||||
Sbjct 907308 ATCGCACCCGGGTTGAGTGATGTTTATGGCAGCGAGTTCGTTAAAATGTACGAGAAATAT 907367
Query 110991 GAAA---AAGAA--GGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045
|||| ||| | ||| | | || || ||| ||| ||| |||||||||| ||
Sbjct 907368 GAAACTCAAGGATTGGC-ATCTGCGACAATAAA----AGCCCAAAAACTTTGGTTAGCAA 907422
Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105
| | || |||||| ||| || ||| ||| || || ||||||||||| |||||
Sbjct 907423 TTTTGGAGTCACAAACTGAGACAGGAGGTCCGTACATGTTGTATAAAGACGCCTGTAATC 907482
Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
||| |||| || ||| |||||||||| ||||| || || |||||||
Sbjct 907483 AAAAAACTAACCAGTCCAATCTAGGAACAATCAAGTCCTCAAACTTATGCTGTG 907536
Score = 105 bits (116), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| ||| | ||| ||| | ||||| | ||||| || ||||||||||||||
Sbjct 15404 CATTTGATGGACGACGATCCAGTTTTATTCAACCGTCAACCTTCGTTGCATAAAATGTCT 15345
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAAGTG 305426
|||||||| |||| ||| || || | || | ||||| |||| || ||| |||
Sbjct 15344 ATGATGGCGCATAGAGTTAAGGTTATGCCTTATTCTACATTCAGATTGAACTTGTCAGT- 15286
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| ||||||||||||| ||||| ||||| || |||||||| |||||||||| || |
Sbjct 15285 -TACCTCGCCTTATAATGCAGATTTCGATGGTGACGAAATGAACTTGCATGTACCACAGT 15227
Query 305487 C 305487
|
Sbjct 15226 C 15226
>seq7
Length=937312
Score = 111 bits (122), Expect = 4e-19
Identities = 93/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 167240 CATTACACCACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAAC 167299
||| | | ||||||||||||| |||||| ||||||||| |||||||||| ||||||
Sbjct 395389 CATCATAGCACCAGCATTATCAAATTCACCACAATAATTTGGAGCTGAAAATAAAGTAAC 395330
Query 167300 TAATTTACGATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353
|||| ||| || || ||||||||||||||||||||||||| ||| |||||
Sbjct 395329 CAATTGACGTTTACTGAAAAATTCATAACCATCTTCAACAACTTGATGAGCACG 395276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812678351688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |