Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 228 2e-54 seq4 156 1e-32 seq7 111 4e-19 >seq1 Length=2936865 Score = 228 bits (252), Expect = 2e-54 Identities = 579/868 (67%), Gaps = 17/868 (2%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||||||||||||||||||| | ||| | | ||||| | ||| ||||||| | | Sbjct 2417459 ACTATTTTGGTTTCAAAACTTTAGAAAGATCATATTTGTTACGTATCAATGGTAAAGTAG 2417400 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||| | || || || || || | | ||||| || ||||| |||||| ||||| Sbjct 2417399 CTGAAAGACCACAGCATTTGATTATGAGAGTTGCTATCGGTATACATGGAAGAGATATCC 2417340 Query 110422 AAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480 | || |||||| |||| | | || | ||| | | || ||||| | ||||| Sbjct 2417339 CAAGAGTCATTGAAACTTATAACTTGATGTCGCAAAGATACTT-TACTCATGGTTCTCCT 2417281 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAAT 110539 | ||||| || || ||| | |||| || | ||||| |||||| | | ||| Sbjct 2417280 TGTTTGTTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAAT 2417222 Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTC 110596 || || ||||||||||||||||||||||| | |||||| |||| ||| | ||||| Sbjct 2417221 GAAAGAAGATTCTATTGAAGGTATTTATGACAC-CTTAAA--AACTTGTGCTTTAATTTC 2417165 Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656 || | |||| || |||||| | ||| |||| | ||||| || | || || |||| Sbjct 2417164 AAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCCACTGGTGCTTATAT 2417105 Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716 || | || ||| |||| | ||| || | || ||| | | || |||||| |||| Sbjct 2417104 TGCTGGTACAAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACAC 2417045 Query 110717 TGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGA 110773 ||| ||||| ||||||||||| |||||| ||| | |||||| | ||||| || Sbjct 2417044 TGCCCGTTATGTTGATCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCTTTGTATCTTGA 2416985 Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833 ||| ||||| ||||| ||||| ||| | || | | || || || || ||||| Sbjct 2416984 ACCATGGCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGA 2416925 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | ||||| | |||||||| || |||||||| ||||||| || ||||| | || Sbjct 2416924 AATTAGAGCTAGAGATTTATTCCCGGCCTTGTGGATTCCAGATTTGTTTATGAAGAGAGT 2416865 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 | || ||||||| |||| | | | | ||| || |||| || | | || Sbjct 2416864 TGAACAAAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCCGACAC 2416805 Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCA 111012 ||||| | ||||||| || | |||||||||||||||| ||||| | | | | Sbjct 2416804 TTATGGTGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAA 2416745 Query 111013 AACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 ||| | || | |||||| | | |||| | ||| | ||| | ||| |||||||| Sbjct 2416744 AACCA--TCAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGT 2416687 Query 111072 ACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGA 111131 || || | || |||||||| ||| | ||| ||| || || || | ||||||||| Sbjct 2416686 ACCCCATTCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAGAAGAATTTAGGT 2416627 Query 111132 ACAATTAAGTCTAGTAATTTGTGCTGTG 111159 | || || ||| || ||||| |||| Sbjct 2416626 ATTATCAAATCTTCCAACTTGTGTTGTG 2416599 Score = 141 bits (156), Expect = 2e-28 Identities = 480/732 (66%), Gaps = 27/732 (4%) Strand=Plus/Plus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 ||||| |||||| ||| || | |||||||| | |||||| |||||| | |||||| Sbjct 2539439 ATGTACAAGAAAGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGAT 2539498 Query 131525 ATTGATGATTGG---GAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGT-TCT 131580 || |||||||| |||||||||| | |||||| | || | | || ||| ||| Sbjct 2539499 CTTCATGATTGGAGAGAAAAATTAAACGATAATGAAC--GTTTCTTTATCGGAAGAATCT 2539556 Query 131581 TG-CATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTC 131639 || | ||||| |||| | ||||| ||||||| ||| || | || || || ||| Sbjct 2539557 TGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAGAACTTGGTGGAAAACTT--TTC 2539614 Query 131640 AA--GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATC 131697 | ||| || | ||||| |||| | ||| |||||| ||| ||| | ||| Sbjct 2539615 AGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAA 2539674 Query 131698 TATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAA 131757 ||||| || | || |||||||||||||| | | | | || || | | || Sbjct 2539675 CATTCACTCAGAAACTTACTCATTATTGATTGAAACTTATATCAAGGATCCAAAAGAAGC 2539734 Query 131758 AAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGC 131817 | ||||| ||||| | | | |||| |||||||||||| || || ||||| Sbjct 2539735 TGACTTCTTATTCAATGCTATTGAAACCATTCCACAAATTAAAAAGAAGGCTGATTGGGC 2539794 Query 131818 TATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACA---AGACTTGTAGCTTTTGC 131874 || | |||||| |||||| |||| || | | | ||| | || ||||| || Sbjct 2539795 CATCAGATGGATCCAAGAT---TCCGAGGCATTGTTTGCCGAGAGATTGGTTGCTTTCGC 2539851 Query 131875 TTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG---CTATCTTTTGGCTTAAGAA 131931 | |||||||||||| | |||||| ||| || | || |||| || ||| | ||||| Sbjct 2539852 TGCTGTTGAAGGTATCT--TTTTCA-GTGGTTCATTTGCATCTATTTTCTGGTTGAAGAA 2539908 Query 131932 GCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATT 131991 | || |||||||| ||| | | || ||||| |||| || | | || |||| || Sbjct 2539909 AAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGGTTT 2539968 Query 131992 GCATACTGAATTTGCTATATTAATCTATAGAAAATTTGC-TGATAAACTTGATGAAAATA 132050 || ||||| ||||| || || || | | |||| | ||| || ||| ||| | Sbjct 2539969 ACACACTGACTTTGC-ATGTTTATTATTTGCCCATTTACAACATAGACCAGATCCAAAGA 2540027 Query 132051 ATATTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTT 132110 || || | |||| | ||||| ||||| || || || || || |||| || |||| Sbjct 2540028 TCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTT 2540087 Query 132111 TGCCTTGCAATTTGATTGGG-ATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTT 132169 | || | | || |||||| |||||| | | | ||| | || ||||||| ||| Sbjct 2540088 TACC-AGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTT 2540146 Query 132170 GCTGATCGTTTA 132181 |||||| | ||| Sbjct 2540147 GCTGATAGATTA 2540158 >seq4 Length=1591921 Score = 156 bits (172), Expect = 1e-32 Identities = 435/654 (67%), Gaps = 25/654 (4%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAA 110578 ||||| |||||| |||| ||| || |||||||| ||||| || || ||| | | ||| | Sbjct 906894 TCTTG-TTTCTTGCTAGCAATGAAGGATGATTCCATTGATGGAATCTATCAAACACTTCA 906952 Query 110579 AGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG 110638 ||| | || | ||||| ||| ||||| || ||||| || || |||| |||| | Sbjct 906953 CGAAGCAGCCTTGATTTCCAAAGCTTCTGGTGGGATTGGGATCCATATTCACAATATCAG 907012 Query 110639 CTCAAAAGGA--GCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATG 110696 | ||||| ||| || | | | | | ||| | | | ||| | ||||| ||| Sbjct 907013 AGCGCAAGGATCGCACAT-TAGTAGTACTAATGGGAGAT-CTGGTGGGGTAGTTCCCATG 907070 Query 110697 TTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGC 110753 || | || |||||| |||| ||| |||||| | ||||| || || ||| || Sbjct 907071 TTGCGCGTTTTCAACAACACCGCACGATATGTTGACCAAGGCGGAGGAAAAAGACCAGGA 907130 Query 110754 TCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT 110813 ||||||| |||||| | |||||||||||| | || || ||||| | || | | | Sbjct 907131 GCATTTGCAATCTATATGGAACCTTGGCATGCTGACATCTTTGACATTTTGAATATGAGG 907190 Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 |||||||| || |||||||| || | | ||||| || |||| | |||||| || Sbjct 907191 AAAAATCACGGCAATGAAGAACTTCGAACTAGAGATTTGTTCTATGGGTTATGGATTCCA 907250 Query 110874 GATTTATTCATGAAACGTGTTCA---AGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT 110930 ||||| |||||| || | || | || | ||| || ||||| | | | ||| || Sbjct 907251 GATTTGTTCATGCAAAGAGTGAAATCAGGAGATG--AT-TGGTCGTTATTCTCTCCCGAT 907307 Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATAT 110990 | || || | |||||| ||||| | ||||| | | | ||||| |||||| Sbjct 907308 ATCGCACCCGGGTTGAGTGATGTTTATGGCAGCGAGTTCGTTAAAATGTACGAGAAATAT 907367 Query 110991 GAAA---AAGAA--GGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045 |||| ||| | ||| | | || || ||| ||| ||| |||||||||| || Sbjct 907368 GAAACTCAAGGATTGGC-ATCTGCGACAATAAA----AGCCCAAAAACTTTGGTTAGCAA 907422 Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 | | || |||||| ||| || ||| ||| || || ||||||||||| ||||| Sbjct 907423 TTTTGGAGTCACAAACTGAGACAGGAGGTCCGTACATGTTGTATAAAGACGCCTGTAATC 907482 Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||| |||| || ||| |||||||||| ||||| || || ||||||| Sbjct 907483 AAAAAACTAACCAGTCCAATCTAGGAACAATCAAGTCCTCAAACTTATGCTGTG 907536 Score = 105 bits (116), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| ||| | ||| ||| | ||||| | ||||| || |||||||||||||| Sbjct 15404 CATTTGATGGACGACGATCCAGTTTTATTCAACCGTCAACCTTCGTTGCATAAAATGTCT 15345 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAAGTG 305426 |||||||| |||| ||| || || | || | ||||| |||| || ||| ||| Sbjct 15344 ATGATGGCGCATAGAGTTAAGGTTATGCCTTATTCTACATTCAGATTGAACTTGTCAGT- 15286 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | ||||||||||||| ||||| ||||| || |||||||| |||||||||| || | Sbjct 15285 -TACCTCGCCTTATAATGCAGATTTCGATGGTGACGAAATGAACTTGCATGTACCACAGT 15227 Query 305487 C 305487 | Sbjct 15226 C 15226 >seq7 Length=937312 Score = 111 bits (122), Expect = 4e-19 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 167240 CATTACACCACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAAC 167299 ||| | | ||||||||||||| |||||| ||||||||| |||||||||| |||||| Sbjct 395389 CATCATAGCACCAGCATTATCAAATTCACCACAATAATTTGGAGCTGAAAATAAAGTAAC 395330 Query 167300 TAATTTACGATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353 |||| ||| || || ||||||||||||||||||||||||| ||| ||||| Sbjct 395329 CAATTGACGTTTACTGAAAAATTCATAACCATCTTCAACAACTTGATGAGCACG 395276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812678351688