Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 410 2e-109 >seq1 Length=2936865 Score = 410 bits (454), Expect = 2e-109 Identities = 1219/1861 (66%), Gaps = 37/1861 (2%) Strand=Plus/Plus Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424 ||||| | || || ||||| | | || |||| || ||| | | |||||||||||| Sbjct 2415620 TTATCGATAGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCA 2415679 Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484 || || | ||| ||||||| || || ||||||||||| | ||| |||| Sbjct 2415680 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 2415739 Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 || ||||| || || | ||||| |||||| ||||| ||| | ||||| | ||| Sbjct 2415740 TCCTTGATATGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 2415799 Query 68545 ATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCA 68604 || | |||||| |||||||| |||||||| | ||||| | | ||| || ||| Sbjct 2415800 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 2415859 Query 68605 TCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATC 68661 || || | | | | ||| ||||| ||| | || ||||| || |||| || Sbjct 2415860 TCGGGGATATTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 2415919 Query 68662 TCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720 |||| ||||| ||| | || ||| | | | | | |||||||| ||||| Sbjct 2415920 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 2415978 Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780 ||||| |||| |||||||| | | ||| || || || |||||||| | | |||| Sbjct 2415979 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 2416038 Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 ||| || |||| |||||| | || || || |||||||| || |||||||| ||| || Sbjct 2416039 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 2416098 Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900 ||| | ||||||| | | ||| | ||| | | | ||||||||| | || | || Sbjct 2416099 TCTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGG 2416158 Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGT 68960 | ||| | || ||||||| | || | ||| |||||| | || || Sbjct 2416159 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 2416218 Query 68961 TTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAAT 69020 ||||||||| ||||| | || || | |||| | || || | ||| ||| ||| || Sbjct 2416219 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 2416278 Query 69021 TGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG-GATAATGTA 69079 ||||||||||| | | || | ||| |||||| | ||||||| ||| | || Sbjct 2416279 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 2416337 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCTTA 69138 ||| || || ||||| ||||| || || || |||||| | || ||||| |||||| | Sbjct 2416338 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCA-ATTGGTCTGTGTCTCATG 2416396 Query 69139 TTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || || | |||||||| || | || |||||||| | ||||| | | | || | || Sbjct 2416397 TTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTA 2416456 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATCGT-----CCA 69249 || || ||||| || || | | ||| ||| | | || ||| ||| Sbjct 2416457 CGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCA 2416516 Query 69250 TCTAT---AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 ||| ||||||| | | || | ||||| | ||||| || || || || | Sbjct 2416517 TCTTGTTCAACAAACGAAGGTAACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCT 2416576 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | || |||| | || || ||| | || | |||||||| | || | ||| Sbjct 2416577 GGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTC 2416636 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 | ||| || ||| ||||||| || ||||| || | || || || ||||||||||| Sbjct 2416637 TTCTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCG 2416696 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACGGTCTTGTA-- 69482 | |||| ||| | || || | ||| | || | ||| || || | | || || Sbjct 2416697 GTTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATG--GTTTTTCTACC 2416752 Query 69483 ACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 ||| |||| |||| |||||| | || | | | || || || || || || Sbjct 2416753 ACGACCTTCCCTTT--CATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCG 2416810 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 ||||||| ||| |||||||||| | | ||||| |||| || ||| | | ||||| Sbjct 2416811 GCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTC 2416870 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||||||| | ||| |||||||| | || || | |||||| | |||| ||||||| Sbjct 2416871 TTCATAAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCC 2416930 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || || ||| | | || | || || | |||||| ||||||||||| ||| Sbjct 2416931 TTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGA 2416990 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || | || | | || |||| || || || || ||||| | || | ||||||||| Sbjct 2416991 TACAAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTG 2417050 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || | || | | ||| || |||||||||||||| |||| ||||| |||| ||||||| Sbjct 2417051 TTGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAA 2417110 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || | | ||||| || ||| | ||| || || || || | || || ||| Sbjct 2417111 GCACCAGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATT 2417170 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTTAAG 69959 | ||||||| ||| || |||||||| ||||| || || ||| ||| ||| || | Sbjct 2417171 AAAGCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACC 2417230 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 |||||| || | |||||||| | | | ||| || |||||||| || |||||| | Sbjct 2417231 AAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACC 2417289 Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079 ||||| || || ||| || | || || || |||||||| || | ||||| | Sbjct 2417290 ATGAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCT 2417349 Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139 ||| || || || || || | ||| | || |||||| |||| ||| | |||| Sbjct 2417350 TCCATGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACC 2417409 Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAA 70197 ||| || |||| |||||| |||| | |||||| || |||||||||||||| |||| Sbjct 2417410 ATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAA 2417469 Query 70198 A 70198 | Sbjct 2417470 A 2417470 Score = 277 bits (306), Expect = 2e-69 Identities = 607/902 (67%), Gaps = 17/902 (2%) Strand=Plus/Minus Query 39305 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTT 39364 ||||| | |||||| || |||||| || ||| ||| | || || || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 39365 TTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttt 39424 || || |||| || || |||||||| ||||| || |||||||| |||| || |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484 ||| || || | | |||||||| ||||||||||| | ||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATG 39544 | ||||||||| || | | ||||||||| ||| || || | || |||||||| || Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 39545 TCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGT 39604 || || || || || || || | || | || | ||| ||| |||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 ||| | ||| || || |||||| |||| || || || | || |||||||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 || || || | ||| ||||| | ||| | || || | ||| || || | ||||| || Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784 ||| || ||||| ||||| || || || || ||||| | |||||| | | || Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 39785 TC---ATTATGTATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGT 39840 || || || ||||| || || ||||||||||| ||||| || | || || || Sbjct 2539818 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGT 2539760 Query 39841 TTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAA 39900 ||| |||||||| || | | | ||| | ||| || | ||| || || || || Sbjct 2539759 TTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAA 2539700 Query 39901 CAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCT 39960 | || ||||||| || |||||||| ||| || || |||||||| ||| || | Sbjct 2539699 TAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 2539640 Query 39961 TGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCC 40020 ||||| | |||||| || || | |||| ||||| |||| || ||||| || || || Sbjct 2539639 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACC 2539580 Query 40021 ATCACTAGCGGCAAAAAATGCCAATACATGTT----TAATAAAATATTTTTCATCGGGTG 40076 ||| |||||||| || ||||| | | || ||| ||| || | |||| Sbjct 2539579 ATCGGATGCGGCAAAGAAAGCCAAGA-TTCTTCCGATAAAGAAACGTTCATTATCG---T 2539524 Query 40077 TCAATTTAT---TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 40133 | ||||| | |||| |||| | |||||| || ||| | ||||||||||||||| | Sbjct 2539523 TTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGA 2539464 Query 40134 ACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAA 40193 | || ||||| || || |||||||| | ||| || ||| | ||| |||||||| || | Sbjct 2539463 ATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGA 2539404 Query 40194 CA 40195 || Sbjct 2539403 CA 2539402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908731309120