Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 223 3e-53 seq4 125 6e-24 >seq1 Length=2936865 Score = 223 bits (246), Expect = 3e-53 Identities = 592/886 (67%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761 |||| |||||||||| ||| ||||| || |||||||||||||| ||||| |||| || Sbjct 2539402 TGTCATGTTTCCAATCAGATACCATGAAATCTGGCAAATGTACAAGAAAGCTGAGGCTTC 2539461 Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTA 43819 ||| |||||||| |||||| | ||||| |||||| ||| || |||||| | | | Sbjct 2539462 ATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGATCTT--CATGATTGGAGAGAAAAA 2539519 Query 43820 --AAACCACAAGAAAAACATTT-TATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCG 43874 |||| | || || | ||| | |||| | | ||||| || ||||| || || Sbjct 2539520 TTAAACGATAATGAA--CGTTTCTTTATCGGAAGAATCTTGGCTTTCTTTGCCGCATCCG 2539577 Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934 | || || || ||||| || ||||| ||| | ||||||||| | ||||||| Sbjct 2539578 ATGGTATTGTTAATGAGAACTTGGTGGAAAACTTTTCAGCTGAAGTTCAAATTCCAGAAG 2539637 Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994 | || ||| || || || |||||| || ||||| ||||| || |||| ||| Sbjct 2539638 CTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATTCACTCAGAAACTTACTCAT 2539697 Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGAT 44052 | |||| || || || ||||| ||| || |||||| | || || ||||| || Sbjct 2539698 TATTGATTGAAACTTATATCAAGGATC--CAAAAGAAGCTGACTTCTTATTCAATGCTAT 2539755 Query 44053 AGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTC 44109 ||||| | || |||||| | || || || |||||| | | |||||| | |||| Sbjct 2539756 TGAAACCATTCCACAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTC 2539815 Query 44110 AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTC 44169 | | | |||| || || | || || || || | ||| ||||| || || |||| Sbjct 2539816 CGAGGCATTGTTTGCCGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTT--TTTC 2539873 Query 44170 AG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227 || | || ||||| | || || ||||| |||||| ||||||||||||| || || || Sbjct 2539874 AGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACT 2539933 Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287 || || || || ||||| ||||||| ||||| ||||| || ||||| || || ||| Sbjct 2539934 TTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGACTTTGCATGTTTATTA 2539993 Query 44288 CTTGGATATCTAGGAGA-CGATAAGCCTTCATGTAAGA-CAATTACAGATATTGTTGTAG 44345 ||| || || | | || || | || |||| | | | ||| ||| || | Sbjct 2539994 TTTGCCCATTTACAACATAGACCAG-ATCCA---AAGATCGTTGAAAGA-ATTATTACTG 2540048 Query 44346 AGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAA 44405 | || || | || ||| ||||||| | || || ||||| || | |||| | || | Sbjct 2540049 AAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTACCAGTTAGTTTATTGGGTA 2540108 Query 44406 TGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAAC 44465 ||||| || ||| |||||| |||||| |||| ||| | ||| | | | Sbjct 2540109 TGAATTGTAAATTAATGTGTCAATATGTTGAATTTGTTGCTGATAGATTATTGGTTGCTT 2540168 Query 44466 TGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGT 44525 ||||| | ||| || | ||| || || || |||||||||||||| ||||| | Sbjct 2540169 TGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTCGATTTTATGGAAAACATTTCCT 2540228 Query 44526 TGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 ||| || || || || || |||||||| | ||| || ||||| Sbjct 2540229 TGGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTATCA 2540274 >seq4 Length=1591921 Score = 125 bits (138), Expect = 6e-24 Identities = 248/366 (68%), Gaps = 22/366 (6%) Strand=Plus/Minus Query 19430 CCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || || |||||||| ||||| || | ||| ||||| ||| ||| || || || Sbjct 523593 CCAAAGATAGTCAATGGTCCAGAAATGTTGAGTAAGTATGTTGGTGCATCTGAGGAGAAC 523534 Query 19489 GTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA 19542 | || ||||| |||||| |||||| | ||| ||| || ||| | | | Sbjct 523533 ATTCGTAACTTGTTCAAGGATGCTGAAGCTGAATATAAACTCAAAGGTG-AGGACTCCGA 523475 Query 19543 AGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT 19602 |||||| |||| || | ||||||||||| | | | || ||||||||||| Sbjct 523474 C-----TTGCACGTTATTATCTTCGATGAATTGGATTCCGTATTCAAACAAAGAGGTTCA 523420 Query 19603 GG---------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 || | || ||| || ||||| ||| || || ||| | | |||||| | Sbjct 523419 GGAAAAAGCGACGGAACTGGTGTTGGTGACAATGTAGTGAACCAATTGTTATCAAAAATG 523360 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTA 19713 ||||||||| | || | || ||||| | |||||||| ||||| |||||||| || || Sbjct 523359 GACGGTGTTGATCAGTTAAACAATATCCTTGTTATTGGTATGACCAATAGACTTGATTTG 523300 Query 19714 ATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCC 19773 || || | ||||| || |||| ||| | || ||||| |||| |||||| ||||| Sbjct 523299 ATTGATACTGCCTTGTTGAGACCTGGTAGATTTGAAATTCAGATTGAAATTGCTTTACCG 523240 Query 19774 GATGAA 19779 |||||| Sbjct 523239 GATGAA 523234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455961248040