Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq1 100 2e-16 >seq4 Length=1591921 Score = 111 bits (122), Expect = 1e-19 Identities = 201/291 (69%), Gaps = 5/291 (2%) Strand=Plus/Minus Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707 |||| | ||| |||||||| || | ||||||| | || |||| |||||||| | Sbjct 907270 ACTCTTTGCATGAACAAATCTGGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGT 907211 Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767 ||||| | || | |||| ||| ||| |||| ||| || ||||| |||||||| ||| Sbjct 907210 TCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGT 907151 Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGCTTACC---GCCTTGATTAACATGACGAACC 131824 |||| ||| | ||| | ||| ||| | || || |||||| | ||||| || | Sbjct 907150 TCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCG 907091 Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884 |||||||| | |||||||||||||| | | || | | ||||| || || || Sbjct 907090 GTGTTGTTGAAAACGCGCAACATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTA 907031 Query 131885 ATGTAGCTGCCATTG-GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 |||| || | ||| |||||||| ||||||| | || ||||| || || Sbjct 907030 ATGT-GCGATCCTTGCGCTCTGATATTGTGAATATGGATCCCAATCCCACC 906981 >seq1 Length=2936865 Score = 100 bits (110), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 130753 aTTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||||| ||||| || |||||||||| || | ||| ||| ||||| ||| | || Sbjct 2415967 ATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGG 2416026 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 |||||| |||| ||||| || || ||||||| ||| | ||||| ||||| ||||| Sbjct 2416027 TTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCAC 2416086 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 || | ||| || | | ||| || | | | |||| |||||||||||||||||||| Sbjct 2416087 CAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCA 2416146 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973 || ||||| || ||| ||||| ||| |||||| Sbjct 2416147 TAATTCTGTAGGCTT---TCTGTCCCACAAGTCATATTGTA 2416184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934358568896