Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 1e-19
seq1 100 2e-16
>seq4
Length=1591921
Score = 111 bits (122), Expect = 1e-19
Identities = 201/291 (69%), Gaps = 5/291 (2%)
Strand=Plus/Minus
Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707
|||| | ||| |||||||| || | ||||||| | || |||| |||||||| |
Sbjct 907270 ACTCTTTGCATGAACAAATCTGGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGT 907211
Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767
||||| | || | |||| ||| ||| |||| ||| || ||||| |||||||| |||
Sbjct 907210 TCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGT 907151
Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGCTTACC---GCCTTGATTAACATGACGAACC 131824
|||| ||| | ||| | ||| ||| | || || |||||| | ||||| || |
Sbjct 907150 TCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCG 907091
Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884
|||||||| | |||||||||||||| | | || | | ||||| || || ||
Sbjct 907090 GTGTTGTTGAAAACGCGCAACATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTA 907031
Query 131885 ATGTAGCTGCCATTG-GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934
|||| || | ||| |||||||| ||||||| | || ||||| || ||
Sbjct 907030 ATGT-GCGATCCTTGCGCTCTGATATTGTGAATATGGATCCCAATCCCACC 906981
>seq1
Length=2936865
Score = 100 bits (110), Expect = 2e-16
Identities = 155/221 (70%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 130753 aTTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812
||||| ||||| || |||||||||| || | ||| ||| ||||| ||| | ||
Sbjct 2415967 ATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGG 2416026
Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872
|||||| |||| ||||| || || ||||||| ||| | ||||| ||||| |||||
Sbjct 2416027 TTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCAC 2416086
Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932
|| | ||| || | | ||| || | | | |||| ||||||||||||||||||||
Sbjct 2416087 CAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCA 2416146
Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973
|| ||||| || ||| ||||| ||| ||||||
Sbjct 2416147 TAATTCTGTAGGCTT---TCTGTCCCACAAGTCATATTGTA 2416184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934358568896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |