Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 275 7e-69
seq4 96.9 4e-15
seq2 95.1 1e-14
>seq1
Length=2936865
Score = 275 bits (304), Expect = 7e-69
Identities = 947/1462 (65%), Gaps = 31/1462 (2%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTCTTGAT 104214
||||||||| ||||||| | || |||| | ||| | ||| || ||||| |
Sbjct 2417457 TATTTTGGTTTCAAAACTTTAGA-AAGATCATATTTGTTACGTATCAATGGTAAAGTAGC 2417399
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
|||| |||||| | || | ||| | || || |||||||| ||||| |||| || |
Sbjct 2417398 TGAAAGACCACAGCATTTGATTATGAGAGTTGCTATCGGTATACATGG--AAGAGAT--A 2417343
Query 104275 TTCT----GTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACAC 104330
| | ||| | || || || || |||||| ||| | || | ||| | | |
Sbjct 2417342 TCCCAAGAGTCATTGAAACTTATAACTTGATGTCGCAAAGATACTTTACTCATGGTTCTC 2417283
Query 104331 CAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCA 104390
| | || ||||||||||| |||| ||| |||||||| ||| ||| | | || |
Sbjct 2417282 CTTGTTTGTTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAA 2417223
Query 104391 ACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA-GTGTGCGCAAATCTCA 104449
|| || || || || | ||||| |||| || |||| | ||||| ||| |||
Sbjct 2417222 TGAAAGAAGATTCTATTGAAGGTATTTATGACAC-CTTAAAAACTTGTGCTTTAATTTCA 2417164
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
||| | ||||| |||||||| ||||||| || | | | ||| | || ||||
Sbjct 2417163 AAGAGTGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCCACTGGTGCTTATATT 2417104
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| ||||| ||| || |||||||||| || ||| |||| || || ||| |||
Sbjct 2417103 GCTGGTACAAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACT 2417044
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| || ||||| |||||| | || | | || || || | || | ||||||||
Sbjct 2417043 GCCCGTTATGTTGATCAAGGT-GGTAACAAGAGACCTGGTGCTTTTGCTTTGTATCTTGA 2416985
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
||||||||| |||||| | || ||| ||||| | | ||||| ||| | || ||
Sbjct 2416984 ACCATGGCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGA 2416925
Query 104686 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745
| | ||| | ||| | || | |||||||||||| | || |||||||||||
Sbjct 2416924 AATTAGAGCTAGAGATTTATTCCCGGCCTTGTGGATTCCAGATTTGTTTATGAAGAGAGT 2416865
Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805
||| | | ||| | ||| | | || | |||| | | || || || | |||| |
Sbjct 2416864 TGAACAAAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCCGACAC 2416805
Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC 104865
||||| ||||||| | | ||| ||| || || |||||||| | |
Sbjct 2416804 TTATGGTGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAA 2416745
Query 104866 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925
|| | ||| | ||||| | | || | | |||||||||| ||||||||
Sbjct 2416744 AACCATCAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTAC 2416685
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|||| |||| | || || || || |||||| ||| || || |||||||| ||| |
Sbjct 2416684 CCCATTCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAGAAGAATTTAGGTAT 2416625
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
||||| |||||| | ||| ||||| | |||| ||| ||| || ||
Sbjct 2416624 TATCAAATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGC 2416565
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACAT 105104
||| |||||| | ||||| || || | || || ||| || | ||| | ||| ||
Sbjct 2416564 TGTCTGTAACTTGGCATCGATTGCGTTACCTTCGTTTGTTGAACAAGATGGTAAACACGC 2416505
Query 105105 TTG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159
||| | | ||| || | || || ||||| ||| ||| || ||| | |||||
Sbjct 2416504 TTGGTACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAG 2416445
Query 105160 AGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACA 105216
||| || || || |||| |||||| || ||| ||| |||||||| ||||||||
Sbjct 2416444 AGTCATAGACAGGAATTATTACCCAGTCCCTGA---AGCTGAGAAATCTAACATGAGACA 2416388
Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276
| | ||||||| | || || || ||| | || |||| ||||| ||| | ||
Sbjct 2416387 CAGACCAATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGG 2416328
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
||| |||||| | ||||| | ||| | || | || || || || || ||||||||
Sbjct 2416327 ATTCGATTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGC 2416268
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||| |||| || | || |||||| | | || ||||| |||||||||| | ||
Sbjct 2416267 TGCTGTTGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGG 2416208
Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTC 105455
|| ||||| || ||||| || | |||| ||| ||||||| | || | | || |
Sbjct 2416207 ATCACCAGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGAAAGCCTACAGAATT 2416148
Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
| | || ||||| | | || || | | | ||| | | ||| | |
Sbjct 2416147 A-TGGGATTGGGATGAATTGAAAAAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGT 2416089
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575
| |||||||||||||||| || ||||| ||||||| |||||||| |||||||| ||||
Sbjct 2416088 TGGTGGCTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTG 2416029
Query 105576 AACCCTACACGACGAACATCTA 105597
|||| ||||| ||||||||||
Sbjct 2416028 AACCATACACTTCGAACATCTA 2416007
>seq4
Length=1591921
Score = 96.9 bits (106), Expect = 4e-15
Identities = 217/321 (68%), Gaps = 4/321 (1%)
Strand=Plus/Plus
Query 9609 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9668
||||||| |||||||| || ||| | |||||| | || | ||| || || |||||
Sbjct 1370490 TATCAAATCCATCCATTTCAACCAACAATTGGTTCAAGGTGTTTTCACGCTCGTCATTTC 1370549
Query 9669 CTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 9728
| ||||| |||| || | || || || | ||||||||| ||||||| || | ||
Sbjct 1370550 CGCCCATACGACCATTACCTCTTTCTTTACCGATGGCATCAATTTCATCAACAAAAATGA 1370609
Query 9729 TGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 9787
| ||| | || | || | ||| || | ||| |||||||| || || |||
Sbjct 1370610 TTGCTGGAGCCATATCTCTTGCTGTCTTGAACAA-ATCACGTACACGAGATGCACCAACA 1370668
Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGG-AACATTGGATGAAGGGGACATTAGATTC 9846
||||||||||| || || || | || ||| |||| | | ||| || ||| || |||
Sbjct 1370669 CCAACAAACATTTCAACGAATTCTGAACCGGAAACACT-AAGGAATGGTACACCAGCTTC 1370727
Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906
||| ||| ||||| || | | |||||||| ||||| || |||| | || ||
Sbjct 1370728 ACCGGCAGTGGCTTTAGCTAACAAGGTCTTACCTGTACCCGGAGGTCCCGATAAGATTGC 1370787
Query 9907 ACCTCGTGGAATCTTGGCGCC 9927
||| || ||||| ||||| ||
Sbjct 1370788 ACCACGAGGAATTTTGGCACC 1370808
>seq2
Length=2433673
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 154106 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCG 154165
||||| ||||| || ||||| || ||||| ||||| |||||||| || | |||||
Sbjct 2123210 TATGGACGTGTAGCTCCACGTTCAGGTCTTGCTGTCAAACATGGAATTTCAACCGGTGCT 2123151
Query 154166 GGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGAC 154225
|| || ||||| | || ||| ||||||||| ||||| || | || ||||| |||
Sbjct 2123150 GGGGTAATTGATGCTGATTACCGGGGTGAAGTTAAAGTTGTCTTGTTTAATCATTCAGAT 2123091
Query 154226 AAAGACTTTGAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGAGAGGTGTGAG 154285
||| | ||||| | || | ||| || | || || ||| | ||| | || || ||
Sbjct 2123090 AAACATTTTGAAATTAAAAAGGGAGATAGAATTGCTCAATTAGTTTTGGAAAGAATTGTA 2123031
Query 154286 ACACCCGATGTGGAGGAAATTG 154307
| ||||| ||||||||||||
Sbjct 2123030 AATGCCGATTTGGAGGAAATTG 2123009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260741673920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |