Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 7e-31
seq2 120 3e-22
>seq1
Length=2936865
Score = 149 bits (164), Expect = 7e-31
Identities = 671/1050 (64%), Gaps = 35/1050 (3%)
Strand=Plus/Plus
Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774
|||||| | ||||||| || || || || | || || || | ||| | | |||| ||
Sbjct 2416342 CATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGA 2416401
Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834
| ||| || || || | ||||||| | || | || ||||| | ||||| ||| || ||
Sbjct 2416402 TTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGT 2416461
Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCT---- 80884
|||||| ||||||||||| | || | ||||| | | || || || |
Sbjct 2416462 AACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTG 2416521
Query 80885 -TCA-CAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941
||| |||| | || || || | || |||| || || || || || || || | |
Sbjct 2416522 TTCAACAAACGAAGGTAACGCA-ATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAG 2416580
Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001
||| | ||||| ||||| ||||| || ||||| || || |||| | || ||||
Sbjct 2416581 CTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCT 2416640
Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061
|||| ||||||| ||| ||||| ||||| || ||||| | |||||||| || ||| |
Sbjct 2416641 GGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTT 2416700
Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121
| | | | ||||| || ||| | || | ||||||| || | ||||
Sbjct 2416701 GAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACGACCTT 2416760
Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCT 81180
| |||| || |||| || | |||| | |||| | |||| || | | ||
Sbjct 2416761 CCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCAT-AAGTGTCGGCCAATCCT 2416819
Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240
|| || || || | | || ||| || | | || || |||||| ||
Sbjct 2416820 GGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAAC 2416879
Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCT 81298
|| || ||||| | ||| | ||| | || | ||| | | | || | ||| |
Sbjct 2416880 AAATCTGGAATCCACAAGGCCGGGAATAAATCTCT--AGCTCTAATTTCTTCCTTACCGT 2416937
Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358
|||| | | ||| | || || | ||| || |||||||| || ||||||| |
Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997
Query 81359 CGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412
| | | || |||| || |||| || | || ||||||||||| ||| |
Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTAC---CACCTTGATCAACATAACGGGCAGTGTTGTTGA 2417054
Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472
| ||||| | ||||||||| ||||||| || |||||| ||||| | ||| | |
Sbjct 2417055 AAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCAC 2417114
Query 81473 CCTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531
| ||| || | ||| ||| || | ||| || ||||| | | ||||||||| |
Sbjct 2417115 CAGTGGAACGAATGTTG-TGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAA 2417173
Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG 81591
||||| || | ||| |||||||| || || || ||||| |||||| ||| ||||
Sbjct 2417174 GCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 2417233
Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGT 81649
||||| |||||| || || |||| ||| || ||||| |||| || | | |
Sbjct 2417234 AAACAAGATGACATTTGTGG--TTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCAT 2417291
Query 81650 GAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCAC 81709
|| | || || | | ||||||| || ||| ||||| |||| | ||| ||||| |
Sbjct 2417292 GAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTC 2417351
Query 81710 CGTGAATACCGATAGCTACACGCATAAACA 81739
| || ||||||||||| || | ||||| ||
Sbjct 2417352 CATGTATACCGATAGCAACTCTCATAATCA 2417381
>seq2
Length=2433673
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| || | ||||| |||||||| ||| | || ||||| ||
Sbjct 20988 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTC 21047
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| ||| | ||| |||| || || ||||| ||||| ||||| ||||||||
Sbjct 21048 CGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCA 21107
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || || | | | ||| || | ||||| ||
Sbjct 21108 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAA 21167
Query 27585 TGTCCAAAAGGAATCCACT 27603
||||||| ||||| |||
Sbjct 21168 CATCCAAAAAGAATCTACT 21186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310342968960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |