Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 149 7e-31 seq2 120 3e-22 >seq1 Length=2936865 Score = 149 bits (164), Expect = 7e-31 Identities = 671/1050 (64%), Gaps = 35/1050 (3%) Strand=Plus/Plus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| | ||||||| || || || || | || || || | ||| | | |||| || Sbjct 2416342 CATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGA 2416401 Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834 | ||| || || || | ||||||| | || | || ||||| | ||||| ||| || || Sbjct 2416402 TTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGT 2416461 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCT---- 80884 |||||| ||||||||||| | || | ||||| | | || || || | Sbjct 2416462 AACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTG 2416521 Query 80885 -TCA-CAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 ||| |||| | || || || | || |||| || || || || || || || | | Sbjct 2416522 TTCAACAAACGAAGGTAACGCA-ATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAG 2416580 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 ||| | ||||| ||||| ||||| || ||||| || || |||| | || |||| Sbjct 2416581 CTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTCT 2416640 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| ||||||| ||| ||||| ||||| || ||||| | |||||||| || ||| | Sbjct 2416641 GGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTT 2416700 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121 | | | | ||||| || ||| | || | ||||||| || | |||| Sbjct 2416701 GAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACGACCTT 2416760 Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCT 81180 | |||| || |||| || | |||| | |||| | |||| || | | || Sbjct 2416761 CCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCAT-AAGTGTCGGCCAATCCT 2416819 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 || || || || | | || ||| || | | || || |||||| || Sbjct 2416820 GGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAAC 2416879 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCT 81298 || || ||||| | ||| | ||| | || | ||| | | | || | ||| | Sbjct 2416880 AAATCTGGAATCCACAAGGCCGGGAATAAATCTCT--AGCTCTAATTTCTTCCTTACCGT 2416937 Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358 |||| | | ||| | || || | ||| || |||||||| || ||||||| | Sbjct 2416938 GGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAG 2416997 Query 81359 CGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412 | | | || |||| || |||| || | || ||||||||||| ||| | Sbjct 2416998 CAAAAGCACCAGGTCTCTTGTTAC---CACCTTGATCAACATAACGGGCAGTGTTGTTGA 2417054 Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472 | ||||| | ||||||||| ||||||| || |||||| ||||| | ||| | | Sbjct 2417055 AAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCAC 2417114 Query 81473 CCTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531 | ||| || | ||| ||| || | ||| || ||||| | | ||||||||| | Sbjct 2417115 CAGTGGAACGAATGTTG-TGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAA 2417173 Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG 81591 ||||| || | ||| |||||||| || || || ||||| |||||| ||| |||| Sbjct 2417174 GCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 2417233 Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGT 81649 ||||| |||||| || || |||| ||| || ||||| |||| || | | | Sbjct 2417234 AAACAAGATGACATTTGTGG--TTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCAT 2417291 Query 81650 GAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCAC 81709 || | || || | | ||||||| || ||| ||||| |||| | ||| ||||| | Sbjct 2417292 GAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTC 2417351 Query 81710 CGTGAATACCGATAGCTACACGCATAAACA 81739 | || ||||||||||| || | ||||| || Sbjct 2417352 CATGTATACCGATAGCAACTCTCATAATCA 2417381 >seq2 Length=2433673 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || ||||| || | ||||| |||||||| ||| | || ||||| || Sbjct 20988 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACTATCACTTTGGAAGTTGAATCCTC 21047 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | ||| |||| || || ||||| ||||| ||||| |||||||| Sbjct 21048 CGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAAGAGGGTATTCCACCAGACCA 21107 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| ||| | || || | | | ||| || | ||||| || Sbjct 21108 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCCGACTACAA 21167 Query 27585 TGTCCAAAAGGAATCCACT 27603 ||||||| ||||| ||| Sbjct 21168 CATCCAAAAAGAATCTACT 21186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310342968960