Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2 170 5e-37 >seq2 Length=2433673 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | ||| ||||||||||||| ||||| |||| || ||||| || Sbjct 21204 TCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCGGATAAGGTTCTACC 21145 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||| || || ||||| ||||| | || ||||||||| || |||||||| || || Sbjct 21144 GTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCTTT 21085 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || || ||||| |||| ||| || || || ||||| Sbjct 21084 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCAACTTCCAAAGTGAT 21025 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || |||||||| | ||| | ||||||||| Sbjct 21024 AGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTTT 20986 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || |||||||| || || ||||||||||| |||||||| Sbjct 1388833 GAAAATTTGACCATCAGTAATGGAAATAACATTGGTTGGAATATAAGCAGAGACATCACC 1388892 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 |||| ||||| | | || || || || | ||| || |||||| Sbjct 1388893 ACCTTGGGTTTCAATGATTGGCAAAGCAGTCAATGAACCGCCACCA 1388938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552