Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 5e-37
>seq2
Length=2433673
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||||||||||| ||||| |||| || ||||| ||
Sbjct 21204 TCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCGGATAAGGTTCTACC 21145
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || ||||| ||||| | || ||||||||| || |||||||| || ||
Sbjct 21144 GTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCTTT 21085
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| |||| ||| || || || |||||
Sbjct 21084 GTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCAACTTCCAAAGTGAT 21025
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || |||||||| | ||| | |||||||||
Sbjct 21024 AGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTTT 20986
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || |||||||| || || ||||||||||| ||||||||
Sbjct 1388833 GAAAATTTGACCATCAGTAATGGAAATAACATTGGTTGGAATATAAGCAGAGACATCACC 1388892
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575
|||| ||||| | | || || || || | ||| || ||||||
Sbjct 1388893 ACCTTGGGTTTCAATGATTGGCAAAGCAGTCAATGAACCGCCACCA 1388938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531077765552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |