Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 311 7e-80 >seq1 Length=2936865 Score = 311 bits (344), Expect = 7e-80 Identities = 615/897 (69%), Gaps = 25/897 (3%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||| || || || |||| |||||| |||||||| || || || | || Sbjct 2540287 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAA 2540228 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||| |||||||||||||| || |||||||| | |||||| ||||| | | Sbjct 2540227 GGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAA 2540168 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | |||| ||||| |||||||| | ||| || | ||| | || || || || Sbjct 2540167 AGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCAT 2540108 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | ||| || || |||| || | || || || |||| ||| || || ||||| Sbjct 2540107 ACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTC 2540048 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACAAT 4544 || || || ||||| | |||||| || |||| ||| | ||| | |||| ||| Sbjct 2540047 AGTAATAAT-TCTTTCA-ACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAAT 2539990 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| ||||| ||| || ||||||||||| | | ||| | |||||| || || ||| Sbjct 2539989 AAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTT 2539930 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 ||||| ||||| |||||||| || || | ||| || |||| |||||||| ||| || Sbjct 2539929 AATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAA 2539870 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--T 4722 || || ||||| || || || || || || |||| | ||| | || || | | Sbjct 2539869 AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAA--TGCCTCGGAAT 2539812 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| |||||| | | ||||| | ||| || || |||| ||||| || | |||| Sbjct 2539811 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAG 2539752 Query 4783 CGTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 | || ||||| | ||| ||| ||| || | |||||||| || || | || Sbjct 2539751 CATTGAATAAGAAGTCAGCTTCTTT----TGGATCCTTGATATAAGTTTCAATCAATAAT 2539696 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 || |||| || || || ||||| || ||| || |||||||| || || ||||| Sbjct 2539695 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 2539636 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 |||| | ||||||||| |||| |||| || ||||| || || || ||||| || Sbjct 2539635 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCG 2539576 Query 4959 CTGGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGT 5015 || ||||| || ||||| | | | | |||||| | |||| | | | |||| | Sbjct 2539575 GATGCGGCAAAGAAAGCCAAGATTCTTCCG--ATAAAGAAACGTTCATTATCGTTTAATT 2539518 Query 5016 TT--TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 || | |||| | | | ||||||| |||||| | ||||||| | ||||| || || | Sbjct 2539517 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 2539458 Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACA 5129 | || ||||| |||||||| ||| || ||| | || ||| || |||| |||||| Sbjct 2539457 CCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTG-ATTGGAAACATGACA 2539402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049558362664