Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1 311 7e-80
>seq1
Length=2936865
Score = 311 bits (344), Expect = 7e-80
Identities = 615/897 (69%), Gaps = 25/897 (3%)
Strand=Plus/Minus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| |||||| || || || |||| |||||| |||||||| || || || | ||
Sbjct 2540287 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCCAA 2540228
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
||||| |||||||||||||| || |||||||| | |||||| ||||| | |
Sbjct 2540227 GGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAA 2540168
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || | |||| ||||| |||||||| | ||| || | ||| | || || || ||
Sbjct 2540167 AGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAATTTACAATTCAT 2540108
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| | ||| || || |||| || | || || || |||| ||| || || |||||
Sbjct 2540107 ACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTC 2540048
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || ||||| | |||||| || |||| ||| | ||| | |||| |||
Sbjct 2540047 AGTAATAAT-TCTTTCA-ACGATCTTTGGATCTGGTCTATGTTGTAAATGGGCAAATAAT 2539990
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| ||||| ||| || ||||||||||| | | ||| | |||||| || || |||
Sbjct 2539989 AAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTT 2539930
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
||||| ||||| |||||||| || || | ||| || |||| |||||||| ||| ||
Sbjct 2539929 AATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAA 2539870
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--T 4722
|| || ||||| || || || || || || |||| | ||| | || || | |
Sbjct 2539869 AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAA--TGCCTCGGAAT 2539812
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
||| |||||| | | ||||| | ||| || || |||| ||||| || | ||||
Sbjct 2539811 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTTTCAATAG 2539752
Query 4783 CGTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838
| || ||||| | ||| ||| ||| || | |||||||| || || | ||
Sbjct 2539751 CATTGAATAAGAAGTCAGCTTCTTT----TGGATCCTTGATATAAGTTTCAATCAATAAT 2539696
Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898
|| |||| || || || ||||| || ||| || |||||||| || || |||||
Sbjct 2539695 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 2539636
Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958
|||| | ||||||||| |||| |||| || ||||| || || || ||||| ||
Sbjct 2539635 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCATCG 2539576
Query 4959 CTGGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGT 5015
|| ||||| || ||||| | | | | |||||| | |||| | | | |||| |
Sbjct 2539575 GATGCGGCAAAGAAAGCCAAGATTCTTCCG--ATAAAGAAACGTTCATTATCGTTTAATT 2539518
Query 5016 TT--TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073
|| | |||| | | | ||||||| |||||| | ||||||| | ||||| || || |
Sbjct 2539517 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 2539458
Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACA 5129
| || ||||| |||||||| ||| || ||| | || ||| || |||| ||||||
Sbjct 2539457 CCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTG-ATTGGAAACATGACA 2539402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049558362664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |