Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 461 1e-124 >seq1 Length=2936865 Score = 461 bits (510), Expect = 1e-124 Identities = 1488/2284 (65%), Gaps = 43/2284 (2%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | || || ||||| | || ||| |||| || ||| | | ||||||||||||| Sbjct 2415620 TTATCGATAGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCA 2415679 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || |||| || ||||||| || || ||||| ||||||| ||| | || Sbjct 2415680 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 2415739 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || ||||| || || | || || |||||| ||||| ||| | ||||||| ||| Sbjct 2415740 TCCTTGATATGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 2415799 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || | ||||| |||||||| |||||||| | || ||| | | | ||| || ||| Sbjct 2415800 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 2415859 Query 77013 TCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 || || | |||| | ||| ||||||||| | ||| ||||| || |||| ||| Sbjct 2415860 TCGGGGATATTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 2415919 Query 77070 TCATCATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 |||| ||||| ||| || || ||| | | | | | |||||||| ||||| Sbjct 2415920 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 2415978 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||| |||| ||| ||||| | | ||| || || || |||||||| | | |||| Sbjct 2415979 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 2416038 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||||| ||||||||||| | || ||||| |||||||| || |||||||| ||| || Sbjct 2416039 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 2416098 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGG 77308 ||| | ||||||| | | ||| | ||| | | | ||||||||| | |||| ||| Sbjct 2416099 TCTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGG 2416158 Query 77309 TACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGT 77368 ||||| | || ||||||| | || | || |||||| | || || Sbjct 2416159 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 2416218 Query 77369 TTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAAT 77428 ||||||||| |||||| || || | |||| | ||||| | || ||| ||| || Sbjct 2416219 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 2416278 Query 77429 TGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA-CGGATAATGTA 77487 ||||||||||| | | || | ||| ||||| ||| || | ||| | || Sbjct 2416279 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 2416337 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 ||| || |||||||| || || || || ||||| | |||| ||||| |||||| | | Sbjct 2416338 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGT 2416397 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607 | || | | |||||| || | || |||||||| ||||||| | | | || | || | Sbjct 2416398 TAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC 2416457 Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAAA----TCTTCCAT 77658 | ||| ||||| || || | | || ||| | ||| | | |||| Sbjct 2416458 GAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 2416517 Query 77659 CTAT---AACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-T 77713 || ||||||| | | | || || || ||||| | ||||| || || || || | | Sbjct 2416518 CTTGTTCAACAAACGAAGGT-AACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCT 2416576 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 | | || |||| | || || ||| | || | |||||||| | || | ||| Sbjct 2416577 GGAGCTGAG-TATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATT 2416635 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 | |||||| ||| | || || | |||||||| | || || || || || ||||| Sbjct 2416636 CTTCTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTC 2416695 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTAT 77891 | || | ||| | || || | ||| | ||| | ||| || || | ||| || Sbjct 2416696 GGTTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATGGTT--TTTCTAC 2416751 Query 77892 CGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 | | | || |||||||||| || | | |||| || || || || || Sbjct 2416752 CACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGG 2416811 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 ||||||| || ||||||||| | | ||||| ||| ||||||| || | ||||| | Sbjct 2416812 CCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCT 2416871 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCAT 78069 ||||||| | ||| || ||||| | || |||| ||||| | |||| |||||| | Sbjct 2416872 TCATAAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCT 2416931 Query 78070 TTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 | || |||||| | | || | || || | |||||| ||||||||||| |||| Sbjct 2416932 TACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGAT 2416991 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 | | || | | | ||||||| || ||||| || ||||| | ||| | ||| ||||| | Sbjct 2416992 ACAAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGT 2417051 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | |||| | | ||| || |||||||| ||||| || || ||||| |||| ||||||| Sbjct 2417052 TGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAG 2417111 Query 78250 TTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTA 78309 ||| | | ||||| || |||| | || || || || || |||| || |||| Sbjct 2417112 CACCAGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTA 2417171 Query 78310 GAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGTTAAGA 78368 ||| ||| ||| || || || || ||||| || ||| || || ||| || | | Sbjct 2417172 AAGCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCA 2417231 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 ||||| || | |||||||| | | ||| || |||||||| || ||||| || Sbjct 2417232 AGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCA 2417290 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 || ||||| || ||| || | | || || |||||||| || | || || | | Sbjct 2417291 TGAGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTT 2417350 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 ||| || || | || || | ||| | || |||||| ||||||||| | ||| | Sbjct 2417351 CCATGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCA 2417410 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 78606 || || ||||| |||||| |||| |||||||| ||||||||||||||||| ||||| Sbjct 2417411 TTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA 2417470 Query 78607 AGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGT--AACAATATC 78664 || | || || | ||| | || || | || ||| | ||| | || ||||| Sbjct 2417471 --TCACGGTCATAGACAATTGCTGAGTTCAATTCATC--AGCATTCTCTTGAATGATATC 2417526 Query 78665 -CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAA 78723 ||| ||||||| || |||| | | | | ||| || || | ||| | Sbjct 2417527 GTATG-TTTCCTTTGAAATCATGGGAGCGTGAAGATTAGTTTCTGGGTTGATATATTCGT 2417585 Query 78724 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAG 78783 | ||||||| || | | | | | ||| | |||| || || | ||| ||||| | Sbjct 2417586 ACAAATCTTTGGAAACCTGAGAATACAATTTAATGGTTTGTTTATGCAAATTGGATACCG 2417645 Query 78784 CTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTT 78843 | || ||||| || | | |||||| || || ||| || || ||| || || | | Sbjct 2417646 CGATCCTTGCTGCCAAGACAGCATAGTCTGGGTGTATGGTGGTCATAGTAGCAGCAGTCT 2417705 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTT 78903 | || || ||| |||| ||||| || |||||||| || | |||| || ||| |||| Sbjct 2417706 CAGCAGCCAAATTATCCAACTCAATGGTTGTGACACCTTGGTATACACCAGCAATGACTT 2417765 Query 78904 TCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAA 78963 | | || || || || ||| | | || || ||||| |||||| || || Sbjct 2417766 TTTGAGTAATAGCAACTGGTTCAACATGATTTGAGTCTAAACCATAGCATAATCTTTGAA 2417825 Query 78964 TACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATTTCGTTTAATAACGA 79023 | || |||||||| ||||| || ||| || | |||| || ||| | |||| Sbjct 2417826 CTCTAGCAGTGATTTTGTCAAAGCGCACTGGCTCTTTTCTACCATCTCTTTTGAAAACGT 2417885 Query 79024 ACAT 79027 |||| Sbjct 2417886 ACAT 2417889 Score = 244 bits (270), Expect = 1e-59 Identities = 604/903 (67%), Gaps = 19/903 (2%) Strand=Plus/Minus Query 47829 TCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTT 47888 ||||| | |||||| || ||||||||| ||| || | || || || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 47889 TTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttt 47948 || || |||| || || |||||||||||||| ||||||||| |||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 47949 ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATT 48008 ||| || || | | | |||||| ||||| ||||| | |||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 48009 TCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATA 48068 | ||||||||| || | | ||||||||| ||| || |||| || |||| ||| || Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 48069 GTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAAATG 48127 ||||| || | || || | | | || | | | |||| || ||||| Sbjct 2540058 TCAACAGCTTC-AGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATG 2540000 Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187 ||| | |||||||||||| ||| || | |||||| || | || |||||||||||| Sbjct 2539999 GGCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTT 2539940 Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247 || || || | || ||||| | || | ||| || | ||| || || | || || || Sbjct 2539939 GGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGA 2539880 Query 48248 TCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC 48307 ||| || || || ||||| || || || || || | |||||| | | || Sbjct 2539879 ACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGC 2539820 Query 48308 TTCG---TTGTGTATCCACC-GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTG 48363 ||| | || ||||| | | || ||||||||||||||||| || | || || | Sbjct 2539819 CTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGTGGAATGG 2539761 Query 48364 TTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA 48423 |||| |||||||| || | |||| ||| || ||| || | ||||| || || | Sbjct 2539760 TTTCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCA 2539701 Query 48424 AAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATC 48483 | | || |||| |||||||| ||||| || || || |||||||| ||| || Sbjct 2539700 ATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATT 2539641 Query 48484 TCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTC 48543 | ||||||| || || || || | |||| ||| |||| |||||||| || || | Sbjct 2539640 TAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATAC 2539581 Query 48544 CATCACTAGCAGCAAAAAATGCTA--ATACAT--GTTTAATAAA--ATATTTTTCGTTGG 48597 |||| || ||||| || || | || | | | | || ||| | || ||||| Sbjct 2539580 CATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTT-T 2539522 Query 48598 AAGTCAGTTTAT-TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 || | ||| | |||| |||| | |||||| || ||| | ||||||||||||||| Sbjct 2539521 AATT---TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 2539465 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716 ||||| ||||| ||||| || ||||| | ||| || ||| |||| |||||| || || Sbjct 2539464 AATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 2539405 Query 48717 ACA 48719 ||| Sbjct 2539404 ACA 2539402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120