Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 439 4e-118 seq4 105 1e-17 >seq1 Length=2936865 Score = 439 bits (486), Expect = 4e-118 Identities = 1222/1858 (66%), Gaps = 31/1858 (2%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | ||||| ||||| | || || || | || ||| | | ||||||||||||| Sbjct 2415620 TTATCGATAGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAGTACATACCA 2415679 Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487 || |||| || ||||||| || || ||||| ||||| | ||| | || Sbjct 2415680 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 2415739 Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547 || ||||| || || | || || |||||| ||||| ||| | ||||||| ||| Sbjct 2415740 TCCTTGATATGGATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 2415799 Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607 || | ||||| |||||||| |||||||| | || ||| | | | ||| || ||| Sbjct 2415800 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 2415859 Query 75608 TCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664 || || | ||||| | ||| ||||| || | || ||||| || |||| || Sbjct 2415860 TCGGGGATATTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 2415919 Query 75665 TCATCATTCCACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTG 75723 |||| ||||| ||| | || ||| | | | | | |||||||||||||| Sbjct 2415920 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 2415978 Query 75724 AAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 75783 ||||| |||| ||| ||||||| | ||| || || || |||||||| | | |||| Sbjct 2415979 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 2416038 Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843 |||||| ||||||||||| | || ||||| || ||||| || |||||||| ||| || Sbjct 2416039 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 2416098 Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGG 75903 ||| | ||||||| | | ||| | ||| | | | ||||||||| | |||| || Sbjct 2416099 TCTCATACCATGTTTGGCAAGTTTTTTTTTCAATTCATCCCAATCCCATAATTCTGTAGG 2416158 Query 75904 TACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGT 75963 ||||| | || ||||||| | || | | || |||||| | || || Sbjct 2416159 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 2416218 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 ||| |||| || || | || || | ||| | || || | ||| ||| ||| || Sbjct 2416219 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 2416278 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG-GATAATGTA 76082 ||||||||||| | | || | ||| ||||| | ||| || ||| | || Sbjct 2416279 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 2416337 Query 76083 AAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 ||| || || ||||| || | || || ||||| | |||| ||||| |||||| | | Sbjct 2416338 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGT 2416397 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 | || | |||||||| || | ||||||||||| | ||||| | | | || | || | Sbjct 2416398 TAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC 2416457 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAAA----TTTTCCAT 76253 ||| ||||| || || | | ||| ||| | ||| ||| |||| Sbjct 2416458 GAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 2416517 Query 76254 CTA--TCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || ||| ||||| | | || || ||||| | ||||| || || || || | | Sbjct 2416518 CTTGTTCAACAAACGAAGGTAACGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTG 2416577 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | | |||| | || || || | || | | |||||| | || | ||| | Sbjct 2416578 GAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCT 2416637 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 |||||| ||| ||||||| | |||||||| | | || || || |||||||| Sbjct 2416638 TCTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGG 2416697 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTATCG 76488 | || | ||| | || || | ||| | ||| | ||| || || | ||| || | Sbjct 2416698 TTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATGGTT--TTTCTACCA 2416753 Query 76489 CTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | | || |||||||||| | || ||| |||| || || || || || || Sbjct 2416754 CGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCGGCC 2416813 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 || || ||| |||||| ||| | | ||||| ||||||||||| || | ||| | ||| Sbjct 2416814 AATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTC 2416873 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 ||||| | ||| || ||||| | || |||| ||||| | |||| |||||| || Sbjct 2416874 ATAAACAAATCTGGAATCCACAAGGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTA 2416933 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| | | || | ||| || | |||||| ||||||||||| ||||| Sbjct 2416934 CCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATAC 2416993 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 | || | | |||| |||| || ||||| || ||||| | ||| | ||||||||| || Sbjct 2416994 AAAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTG 2417053 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 |||| | | ||| || ||||| || ||||| ||||| ||||| |||| ||||||| Sbjct 2417054 AAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCA 2417113 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 ||| | |||||| || ||| | || || || || || | || || |||| | Sbjct 2417114 CCAGTGGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAA 2417173 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGAAG 76965 ||||| ||| || |||||||| || || || ||| ||| || ||| || | ||| Sbjct 2417174 GCACAAGTTTTTAAGGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 2417233 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||| || | |||||||| | | ||| || ||||||||||| |||||| |||| Sbjct 2417234 AAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAACAAACAAGGAGAACCATG 2417292 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 ||| || || ||| || | | || || |||||||| ||| | ||||| | | Sbjct 2417293 AGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCTCTTCC 2417352 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||| || || | ||| || | ||| | || |||||| |||| ||| | ||| ||| Sbjct 2417353 ATGTATACCGATAGCAACTCTCATAATCAAATGCTGTGGTCTTTCAGCTACTTTACCATT 2417412 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 77201 || ||||| |||||| |||| |||||||| ||||||||||||||||| ||||| Sbjct 2417413 GATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACCAAAATAGTTGTAATTGAAA 2417470 Score = 260 bits (288), Expect = 2e-64 Identities = 601/900 (67%), Gaps = 13/900 (1%) Strand=Plus/Minus Query 46318 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTT 46377 ||||| | |||||| || |||||| || ||| || | || || || ||||| || Sbjct 2540297 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 2540239 Query 46378 TTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttt 46437 || || |||| || || |||||||||||||| || |||||||| ||||| |||| |||| Sbjct 2540238 TTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAAACTTTT 2540179 Query 46438 ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATT 46497 ||| || || | | | |||||| ||||| ||||| | ||| ||| | | Sbjct 2540178 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACACATTAAT 2540119 Query 46498 TCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATA 46557 | ||||||||| || | | | || |||| ||| || |||| || |||| |||||| Sbjct 2540118 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 2540059 Query 46558 GTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGT 46617 ||||| || | || || | || | | | |||| ||| ||||| Sbjct 2540058 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGG 2539999 Query 46618 TTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTA 46677 ||| | |||||||||||| ||| || | ||||| || | || |||||||||||| Sbjct 2539998 GCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 2539939 Query 46678 GAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT 46737 || || || | || ||||| | || | || || | ||| || |||| || || || Sbjct 2539938 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 2539879 Query 46738 CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCA 46797 ||| || || || ||||| ||||| ||||| || || | |||||| | | || Sbjct 2539878 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCAAACAATGCC 2539819 Query 46798 TC---ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTT 46854 || || || ||||| || |||||||||||||| || || | || || ||| Sbjct 2539818 TCGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGTGGAATGGTT 2539759 Query 46855 TCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAA 46914 || |||||||| || | |||| ||| | ||| || | ||| || || || || Sbjct 2539758 TCAATAGCATTGAATAAGAAGTCAGCTTCTTTTGGATCCTTGATATAAGTTTCAATCAAT 2539699 Query 46915 AGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTT 46974 | || ||||||| ||||||||||| || || || |||||||| ||| || | Sbjct 2539698 AATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTA 2539639 Query 46975 GCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCA 47034 ||||| | ||| || || || | |||| ||| ||| |||||||| || || ||| Sbjct 2539638 GCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATTAACAATACCA 2539579 Query 47035 TCACTAGCAGCAAAAAATGCCAATACATGTT----TAATAAAATATTTTTCATCGGTAGT 47090 || || ||||| || ||||| | | || ||| ||| || | |||| | | Sbjct 2539578 TCGGATGCGGCAAAGAAAGCCAAGA-TTCTTCCGATAAAGAAACGTTCATTATCGTT--T 2539522 Query 47091 CAGTTT--ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAAT 47148 | ||| |||| |||| | |||||| || ||| | ||||||||||||||||||| Sbjct 2539521 AATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAAT 2539462 Query 47149 GACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACA 47208 || ||||| ||||| || ||||| | ||| || ||| | ||| ||| ||||| || ||| Sbjct 2539461 GAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 2539402 >seq4 Length=1591921 Score = 105 bits (116), Expect = 1e-17 Identities = 234/349 (67%), Gaps = 13/349 (4%) Strand=Plus/Minus Query 75494 ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTT 75553 |||| ||||||||| || ||| |||||||| ||| ||||| || ||||| | | Sbjct 908389 ATATAAATATTCATGCTTTGCAGTTGGTCGATGAACTTTCCCCTATCTGCAGCCATATCT 908330 Query 75554 ATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGA 75613 ||||| ||| || || ||||| | ||| | | | || ||||||||| | || Sbjct 908329 ATAATATCCTTCTGCTTAAGCTCCCACACCGTTCTATATAATTCTTTGATATCTTTGGGT 908270 Query 75614 A-----GATTTGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | ||| ||| || |||| || ||||| || |||||| ||||| | ||| | Sbjct 908269 ATCACCGATATGTCTT--GAATCGAGCCGCCGTCCTGAATAATTCTATTCCTCATCGCCG 908212 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAA---CTCTAAGGAGATGAGGATTAACAATTTGAA 75725 |||||| | | | | | ||| || | | ||||| || || | ||| | Sbjct 908211 AATTCCATA---TACCCAAATCTGAAAGGTCTTTGATGAGATACTTGTTCACCACTTGGA 908155 Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785 | || ||||| | ||||| || ||||| | ||| ||||| ||||| | | |||||| Sbjct 908154 ACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGTTCAAAACATTCAT 908095 Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834 || ||||||||| |||| ||||||||||| ||||| ||||| | ||| Sbjct 908094 TGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATCAA 908046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934328706560