Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1 282 4e-71
>seq1
Length=2936865
Score = 282 bits (312), Expect = 4e-71
Identities = 615/909 (68%), Gaps = 20/909 (2%)
Strand=Plus/Minus
Query 23194 TTATCACTATT---CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAA 23250
|| ||||| || ||||||||| ||||||||| || ||| | |||| || |||
Sbjct 2540304 TTTTCACTCTTGGCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAA 2540245
Query 23251 TTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATAT 23310
|| |||||||| | || || || |||||||||||||| |||||||||| ||| ||
Sbjct 2540244 TTGGTCTTACCAGCCAAGGAAATGTTTTCCATAAAATCGAATGGATTAGTGACATTGTAA 2540185
Query 23311 ACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACAC 23370
|| |||| || | || | ||||| || |||||||||| ||||||||||
Sbjct 2540184 ACTTTTTTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCAACATATTGACAC 2540125
Query 23371 ATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT 23430
|| || | | | || ||||| | || | ||||| | |||||| |||||| ||||
Sbjct 2540124 ATTAATTTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTT 2540065
Query 23431 TCAATGGAAACAGCATCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATAT 23487
||||| |||||| || |||| ||| | ||| || ||| || ||| || |
Sbjct 2540064 TCAATTTCAACAGCTTCAGTAATAATTCTTTCAACGAT--CTTTGGATCT-GGTCTATGT 2540008
Query 23488 TTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATC 23547
| ||||| ||| |||||||||||||| ||| |||| ||||| || | || |||
Sbjct 2540007 TGTAAATGGGCAAATAATAAACATGCAAAGTCAGTGTGTAAACCTTCGTCACGACAAATT 2539948
Query 23548 AATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA 23607
||||| || || || |||||||||||||| || |||| ||| || | ||| || || |
Sbjct 2539947 AATTCGTTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGAT 2539888
Query 23608 GCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCA 23667
|||||||| || || || ||||| |||||||| || || || || | | ||
Sbjct 2539887 GCAAATGAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCGGCA 2539828
Query 23668 AATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACAC 23727
|| ||| | |||| |||||| | | | ||||| ||||||| ||| |
Sbjct 2539827 AACAATGCCTCGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGT 2539768
Query 23728 TCAATTGTTTCAATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGT 23786
||| |||||||| || || || | | |||| ||||| ||| | ||||| ||
Sbjct 2539767 GGAATGGTTTCAATAGCATTGAATA-AGAAGTCAGCTTCTTTTGGATCCTTGATATAAGT 2539709
Query 23787 ATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATA 23846
||||| | ||| || |||| || ||||| ||||| || ||| || || || ||
Sbjct 2539708 TTCAATCAATAATGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTA 2539649
Query 23847 AAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTT 23906
||| || ||||||| | | |||||| ||| |||| ||| | || || || ||
Sbjct 2539648 GAAAGATTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTCTCATT 2539589
Query 23907 AACAATACCATCACTAGCAGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCAT 23965
|||||||||||| || |||||||||| ||||| | | ||||| | |||||
Sbjct 2539588 AACAATACCATCGGATGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCAT 2539530
Query 23966 CA--GTTGATAATTTTT---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAAC 24020
| ||| |||||||| ||||||||| || |||||| |||||| | ||| ||| |
Sbjct 2539529 TATCGTT--TAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGC 2539472
Query 24021 TGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGG 24080
|||||| || ||| || ||| |||||| |||| || |||| | | |||||
Sbjct 2539471 TGTCCAGAATGAAGCCTCAGCTTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGG 2539412
Query 24081 AAATATTAC 24089
||| || ||
Sbjct 2539411 AAACATGAC 2539403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487947851200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |