Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14] 8 sequences; 12,659,401 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1 105 9e-18 seq4 96.9 5e-15 seq2 89.7 7e-13 >seq1 Length=2936865 Score = 105 bits (116), Expect = 9e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 ||||||||| || ||||||||||| ||| ||||| || || || || ||||| | Sbjct 1312631 TTATCCTGTTTATTATATCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATATT 1312572 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 || || || || ||| | || | |||| || || | || |||||| | ||||| Sbjct 1312571 GCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGCGGAGAG 1312512 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891 ||||||||||| |||| || |||||| | ||| | ||||| | ||||| || |||||| Sbjct 1312511 TTTATTCATACCCTAGGTGATGCTCATGTATACTTGGATCATATTGATGCATTGAAGGAG 1312452 Query 50892 CAATTGAC 50899 ||| |||| Sbjct 1312451 CAAATGAC 1312444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || | Sbjct 1312933 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATCAAG 1312874 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| || | ||| || ||||| | |||||| | ||| | | || | || | Sbjct 1312873 ATTGTGATACCGACTACACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAAT 1312814 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 |||| || || || | ||||| | ||| | ||| | || |||||||| | ||| | Sbjct 1312813 TGAAGACTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGATTTCC 1312754 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTA 50695 | | |||||||| |||||||| || ||||||||||| Sbjct 1312753 CATTGATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTA 1312711 >seq4 Length=1591921 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948 || |||||||| ||||| ||||||| |||| | ||| || | |||||||| || || Sbjct 523229 CCTTTTTCATCCGGTAAAGCAATTTCAATCTGAATTTCAAATCTACCAGGTCTCAACAAG 523288 Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008 || ||||| || || |||| ||||||||||| || | | || |||||||| Sbjct 523289 GCAGTATCAATCAAATCAAGTCTATTGGTCATACCAATAACAAGGATATTGTTTAACTGA 523348 Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || |||||||| ||||| || || ||||| || ||||| Sbjct 523349 TCAACACCGTCCATTTTTGATAACAATTGGTTCACTAC 523386 >seq2 Length=2433673 Score = 89.7 bits (98), Expect = 7e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 ||||| ||| | | ||| | | ||| | || | || ||||| |||||||| ||| Sbjct 2172349 GTTAAGGTAAGAATGAGAACAACAAAAGTGCCCCAGATTGGTGACAAATTTGCATCTAG- 2172291 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||| | | |||| |||| |||||||||||||| || Sbjct 2172290 ACATGGTCAAAAAGGTACCATTGGTGTTACTTATAGACATGAAGATATGCCTTTCACAGC 2172231 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 || ||||| || || ||| | ||||||||||||| || | || |||||||| || Sbjct 2172230 GGAAGGTATTGTTCCTGATTTAATCATCAATCCACATGCGATACCATCACGTATGACGGT 2172171 Query 63897 T 63897 | Sbjct 2172170 T 2172170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075133292480