Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F000315875.1_202012-03-14]
8 sequences; 12,659,401 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 9e-18
seq4 96.9 5e-15
seq2 89.7 7e-13
>seq1
Length=2936865
Score = 105 bits (116), Expect = 9e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771
||||||||| || ||||||||||| ||| ||||| || || || || ||||| |
Sbjct 1312631 TTATCCTGTTTATTATATCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATATT 1312572
Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831
|| || || || ||| | || | |||| || || | || |||||| | |||||
Sbjct 1312571 GCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGCGGAGAG 1312512
Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891
||||||||||| |||| || |||||| | ||| | ||||| | ||||| || ||||||
Sbjct 1312511 TTTATTCATACCCTAGGTGATGCTCATGTATACTTGGATCATATTGATGCATTGAAGGAG 1312452
Query 50892 CAATTGAC 50899
||| ||||
Sbjct 1312451 CAAATGAC 1312444
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532
|||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || |
Sbjct 1312933 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATCAAG 1312874
Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592
|||| || | ||| || ||||| | |||||| | ||| | | || | || |
Sbjct 1312873 ATTGTGATACCGACTACACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAAT 1312814
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
|||| || || || | ||||| | ||| | ||| | || |||||||| | ||| |
Sbjct 1312813 TGAAGACTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGATTTCC 1312754
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTA 50695
| | |||||||| |||||||| || |||||||||||
Sbjct 1312753 CATTGATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTA 1312711
>seq4
Length=1591921
Score = 96.9 bits (106), Expect = 5e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948
|| |||||||| ||||| ||||||| |||| | ||| || | |||||||| || ||
Sbjct 523229 CCTTTTTCATCCGGTAAAGCAATTTCAATCTGAATTTCAAATCTACCAGGTCTCAACAAG 523288
Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008
|| ||||| || || |||| ||||||||||| || | | || ||||||||
Sbjct 523289 GCAGTATCAATCAAATCAAGTCTATTGGTCATACCAATAACAAGGATATTGTTTAACTGA 523348
Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
|| |||||||| ||||| || || ||||| || |||||
Sbjct 523349 TCAACACCGTCCATTTTTGATAACAATTGGTTCACTAC 523386
>seq2
Length=2433673
Score = 89.7 bits (98), Expect = 7e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777
||||| ||| | | ||| | | ||| | || | || ||||| |||||||| |||
Sbjct 2172349 GTTAAGGTAAGAATGAGAACAACAAAAGTGCCCCAGATTGGTGACAAATTTGCATCTAG- 2172291
Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836
||| | |||||||||||| |||| | | |||| |||| |||||||||||||| ||
Sbjct 2172290 ACATGGTCAAAAAGGTACCATTGGTGTTACTTATAGACATGAAGATATGCCTTTCACAGC 2172231
Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
|| ||||| || || ||| | ||||||||||||| || | || |||||||| ||
Sbjct 2172230 GGAAGGTATTGTTCCTGATTTAATCATCAATCCACATGCGATACCATCACGTATGACGGT 2172171
Query 63897 T 63897
|
Sbjct 2172170 T 2172170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075133292480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |