Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq69 170 2e-37
>seq69
Length=709337
Score = 170 bits (188), Expect = 2e-37
Identities = 571/878 (65%), Gaps = 23/878 (3%)
Strand=Plus/Minus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
|||||| | |||| ||||| ||| | ||||| || || || || || || | |
Sbjct 558782 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAA 558723
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780
|| || || ||||| |||||||| |||||||| | || ||| |||| | |||||
Sbjct 558722 GGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTT-ATTACCCA 558664
Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840
| | | | ||||||||| || |||||||| | |||||| |||||||||| || |||
Sbjct 558663 AAG-CAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTC 558605
Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900
|| || | | || || || | ||| || || || ||| || || || |||| |||
Sbjct 558604 ATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCT 558545
Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GGTGTATGTTTAAGATGTTTAAACA 16958
|| ||||||| || |||| | || | ||| ||| |||||| | ||| ||| |
Sbjct 558544 TCAGTAATAATTCTTTCAAC--GATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATA 558487
Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018
| |||||||||||| ||||| || ||||| | | || | |||||| || || |
Sbjct 558486 ATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAG 558427
Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078
| || || |||||| |||| |||||| ||||| || || | || || || ||| |
Sbjct 558426 TTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGA 558367
Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138
| || ||||| || || | || || || | |||| || || || || || |
Sbjct 558366 AAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAAT 558307
Query 17139 TACGAATCCATTTCTGCACCCACTCGG----CTTTTTGCTTTATGCAATCCATCGTTTCT 17194
| |||||| | |||| || | |||||| ||| | | || |||||
Sbjct 558306 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGA----ATGGTTTCA 558251
Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254
|| || || ||||| || ||| | | | || | || || || || || | ||
Sbjct 558250 ATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAAC 558191
Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314
||| |||| ||||| ||||| ||||| || || |||||||| || || |||
Sbjct 558190 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 558131
Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374
|| | ||||||||||| | | || |||| | | ||||| || || || || |||
Sbjct 558130 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCG 558071
Query 17375 CTCGCGGCGAAAAACGCCAATA-TATGC--TTAATGAAATATTTTTCGTCCGGTGTAA-- 17429
||||| || || ||||| | | | | ||| |||| || | || || |||
Sbjct 558070 GATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATC--GTTTAATT 558013
Query 17430 GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAG 17489
| | ||| || | | |||||| || ||| | |||||| | ||||| || ||
Sbjct 558012 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 557953
Query 17490 CCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527
|| | ||||| || ||||| | ||| || |||| ||||
Sbjct 557952 CCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTAT 557915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544694295200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |