Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq69 170 2e-37 >seq69 Length=709337 Score = 170 bits (188), Expect = 2e-37 Identities = 571/878 (65%), Gaps = 23/878 (3%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| ||| | ||||| || || || || || || | | Sbjct 558782 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAA 558723 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || || || ||||| |||||||| |||||||| | || ||| |||| | ||||| Sbjct 558722 GGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTT-ATTACCCA 558664 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 | | | | ||||||||| || |||||||| | |||||| |||||||||| || ||| Sbjct 558663 AAG-CAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTC 558605 Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 || || | | || || || | ||| || || || ||| || || || |||| ||| Sbjct 558604 ATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCT 558545 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GGTGTATGTTTAAGATGTTTAAACA 16958 || ||||||| || |||| | || | ||| ||| |||||| | ||| ||| | Sbjct 558544 TCAGTAATAATTCTTTCAAC--GATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATA 558487 Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 | |||||||||||| ||||| || ||||| | | || | |||||| || || | Sbjct 558486 ATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAG 558427 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | || || |||||| |||| |||||| ||||| || || | || || || ||| | Sbjct 558426 TTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGA 558367 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 | || ||||| || || | || || || | |||| || || || || || | Sbjct 558366 AAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAAT 558307 Query 17139 TACGAATCCATTTCTGCACCCACTCGG----CTTTTTGCTTTATGCAATCCATCGTTTCT 17194 | |||||| | |||| || | |||||| ||| | | || ||||| Sbjct 558306 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGA----ATGGTTTCA 558251 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 || || || ||||| || ||| | | | || | || || || || || | || Sbjct 558250 ATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAAC 558191 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||| |||| ||||| ||||| ||||| || || |||||||| || || ||| Sbjct 558190 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 558131 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || | ||||||||||| | | || |||| | | ||||| || || || || ||| Sbjct 558130 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCG 558071 Query 17375 CTCGCGGCGAAAAACGCCAATA-TATGC--TTAATGAAATATTTTTCGTCCGGTGTAA-- 17429 ||||| || || ||||| | | | | ||| |||| || | || || ||| Sbjct 558070 GATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATC--GTTTAATT 558013 Query 17430 GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAG 17489 | | ||| || | | |||||| || ||| | |||||| | ||||| || || Sbjct 558012 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 557953 Query 17490 CCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527 || | ||||| || ||||| | ||| || |||| |||| Sbjct 557952 CCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTAT 557915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544694295200