Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq69 221 1e-52 >seq69 Length=709337 Score = 221 bits (244), Expect = 1e-52 Identities = 593/897 (66%), Gaps = 21/897 (2%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| |||||| ||| | ||||| ||||| || || || || | || Sbjct 558782 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAA 558723 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCC 16018 || || ||||||||||||||||| |||||||| | || ||| | || | ||||| Sbjct 558722 GGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAA-CTTTTTTATTACCCA 558664 Query 16019 AGTTCCGTAAC---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075 | | ||| ||||||||| || |||||||| | ||||||||||||||| | ||| Sbjct 558663 A----AGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAA 558608 Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135 || || || | | | || || | ||| | || || |||| || ||| || |||| Sbjct 558607 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 558548 Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTT-CAGACGGTGTATGGTTTAGGTGTTTAAA 16194 ||||| |||| || || | | ||| | ||| |||| | || || ||| Sbjct 558547 GCTTCAGTAATAAT-TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAA 558489 Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254 | || ||| ||||| || |||| |||||||| | | || | ||||||||| || Sbjct 558488 TAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAA 558429 Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314 |||||| |||||||| |||| |||||| |||||||| || | |||||||| || Sbjct 558428 AGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT 558369 Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374 || || ||||| ||||||| || ||||| | |||| || || || || || Sbjct 558368 GAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGA 558309 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 || | |||||| | |||| || || || | ||| || || ||||| || Sbjct 558308 ATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAAT 558249 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || || || || || ||| | ||| | || || || ||||||| ||| Sbjct 558248 AGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAACGA 558189 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| |||||||||| ||||| || || || || ||||| ||||| || ||| || Sbjct 558188 GTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTC 558129 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | ||||| ||||| | |||| |||| ||| ||| ||||| || ||||| || Sbjct 558128 TGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGA 558069 Query 16615 TGCAGCAAAAAACGCCAATA-TGTGC--TTAATGAAA---TATTTTTCGTCAGATGTAAG 16668 ||| ||||| || ||||| | | | | ||| |||| | || |||| || | Sbjct 558068 TGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTC 558009 Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | |||||| | | |||||| || ||| | |||||| | ||||| || ||| Sbjct 558008 TCT---CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 557952 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTA 16785 | | ||||| || ||||||| ||| || |||| |||| || ||||| | ||| || Sbjct 557951 CTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 557895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413505024800