Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq39 95.1 1e-14
>seq39
Length=58077
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/220 (70%), Gaps = 5/220 (2%)
Strand=Plus/Minus
Query 18796 TTGGCCCCA-TTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854
|||| ||| |||| |||||||| |||||||||||||| || ||||| |||| ||| |
Sbjct 17513 TTGGGACCAGTTTATGGCTTCCAATGGAGACATTTTGGTGCTAAATATCAAGATTGTGAT 17454
Query 18855 TCAAACTATTTACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAA 18912
| |||| || | |||||| | ||||| | ||| ||| || | | | | || |
Sbjct 17453 ACCGACTAC--ACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAATTGAAGA 17396
Query 18913 CAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAA 18972
| || || | ||| |||| || || || |||||||||| ||| |||| || |
Sbjct 17395 CTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGATTTCCCATTGA 17336
Query 18973 TGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012
||| | ||||||||||||| || ||||| ||||||||
Sbjct 17335 TGGCATTACCTCCATGTCATGTATTTTGTCAATTTTACGT 17296
Score = 89.7 bits (98), Expect = 4e-13
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083
||||||||||| | ||||||| |||||| | || ||||| | || || || ||||| |
Sbjct 17221 AATTATCCTGCTTATTATACCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATA 17162
Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAG 19143
|||| |||||| | |||||| | || | || ||||| || | | ||||
Sbjct 17161 TTGCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGTGGAG 17102
Query 19144 ATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAG 19203
| || |||||||| | || ||||| ||| | ||||| ||||||| ||||| || || |
Sbjct 17101 AGTTTATTCATACCCTAGGTGATGCTCATGTGTACTTAGATCATATTGATGCATTGAAGG 17042
Query 19204 TGCA 19207
|||
Sbjct 17041 AGCA 17038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503318346300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |