Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq39 95.1 1e-14 >seq39 Length=58077 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 18796 TTGGCCCCA-TTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854 |||| ||| |||| |||||||| |||||||||||||| || ||||| |||| ||| | Sbjct 17513 TTGGGACCAGTTTATGGCTTCCAATGGAGACATTTTGGTGCTAAATATCAAGATTGTGAT 17454 Query 18855 TCAAACTATTTACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAA 18912 | |||| || | |||||| | ||||| | ||| ||| || | | | | || | Sbjct 17453 ACCGACTAC--ACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAATTGAAGA 17396 Query 18913 CAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAA 18972 | || || | ||| |||| || || || |||||||||| ||| |||| || | Sbjct 17395 CTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGATTTCCCATTGA 17336 Query 18973 TGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 ||| | ||||||||||||| || ||||| |||||||| Sbjct 17335 TGGCATTACCTCCATGTCATGTATTTTGTCAATTTTACGT 17296 Score = 89.7 bits (98), Expect = 4e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 ||||||||||| | ||||||| |||||| | || ||||| | || || || ||||| | Sbjct 17221 AATTATCCTGCTTATTATACCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATA 17162 Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAG 19143 |||| |||||| | |||||| | || | || ||||| || | | |||| Sbjct 17161 TTGCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGTGGAG 17102 Query 19144 ATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAG 19203 | || |||||||| | || ||||| ||| | ||||| ||||||| ||||| || || | Sbjct 17101 AGTTTATTCATACCCTAGGTGATGCTCATGTGTACTTAGATCATATTGATGCATTGAAGG 17042 Query 19204 TGCA 19207 ||| Sbjct 17041 AGCA 17038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503318346300