Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq69 307 1e-78
>seq69
Length=709337
Score = 307 bits (340), Expect = 1e-78
Identities = 619/903 (69%), Gaps = 19/903 (2%)
Strand=Plus/Minus
Query 23823 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 23882
||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||
Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734
Query 23883 TTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTT 23942
|| || | || || || |||||||| ||||| ||||||| || ||||| || | | ||
Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674
Query 23943 TTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATT 24002
||| ||||| || | |||||||| || ||||| || | |||| ||| | |
Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614
Query 24003 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 24062
| ||||||||| || | | ||||||| | ||| |||||| ||||||| ||||||
Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554
Query 24063 GAGACCGCGTCTGTTATAATAGATCTTACT--GTTTCTTCACTC-GGTGGATACAATAAA 24119
|| || || || ||||| |||| | | | || || ||| || ||||
Sbjct 558553 TCAACAGCTTCAGTAATAAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAA 558497
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
|| ||| | |||||||||||||| ||||| ||| ||||| | || ||||||||||
Sbjct 558496 TGAGCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCG 558437
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
||||| || || | ||| ||||| | || | || || | ||| || || || ||||||
Sbjct 558436 TTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAAT 558377
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACC 24298
|| ||| || || || ||||| || || || || |||| | ||| || || | |
Sbjct 558376 GAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAAT 558317
Query 24299 GGCGCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355
| | | | || || ||||| || || |||||||| ||||||||||| | || ||
Sbjct 558316 GCCTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAAT 558258
Query 24356 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 24415
|| || |||||||| || | | ||| ||| || ||| || | || || |||||
Sbjct 558257 GGTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAAT 558198
Query 24416 CAAAAGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474
||| | || | || |||| || ||||||||||| || ||||| ||||||||||||
Sbjct 558197 CAATA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAG 558139
Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTA 24534
|| |||| || | ||| || ||||| |||| ||| | || |||||||| || |
Sbjct 558138 ATTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAA 558079
Query 24535 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGT 24593
| || || || ||||| || ||||| | | ||||| | | || | | ||
Sbjct 558078 TACCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT 558019
Query 24594 GTTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 24650
||| ||| | ||||||||| | ||||||| || ||| | |||||| |||||||
Sbjct 558018 -TTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 557960
Query 24651 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 24710
||||| ||||| ||||| || ||||| | |||||| ||||| ||| |||||||| ||
Sbjct 557959 AATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 557900
Query 24711 ACA 24713
|||
Sbjct 557899 ACA 557897
Score = 264 bits (292), Expect = 1e-65
Identities = 1172/1843 (64%), Gaps = 46/1843 (2%)
Strand=Plus/Plus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| ||||||||||| | ||| || |||| || || | | ||||||||| || || |
Sbjct 432629 CAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCAGTCT 432688
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922
||| || ||||||| ||||| ||||||||||| | ||| | || ||
Sbjct 432689 TTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCT 432748
Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982
||||| || || | ||||| |||||| ||||||||| |||| || | ||||| |
Sbjct 432749 TGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATAT 432808
Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 53042
|| || |||||| | |||||||| | || || || | | ||||| || || |
Sbjct 432809 CGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGG 432868
Query 53043 GAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 53099
| | ||||| | || || || ||| | | ||||| ||| |||| || |||
Sbjct 432869 GGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCAT 432928
Query 53100 CATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 53158
| ||||| ||| | || ||| | | | | | |||||||| | ||| |||
Sbjct 432929 CGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAAT 432987
Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218
|| |||| ||| ||||| | | ||| || || || || ||||| | | | |||||
Sbjct 432988 TCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTG 433047
Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278
|| ||||||||||| | || || || || ||||| || |||||||| ||| |||||
Sbjct 433048 TTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTC 433107
Query 53279 AGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTA 53336
| ||| ||||| | | ||| | ||| | ||||||| ||| | || | ||
Sbjct 433108 ATACC--ATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGCT 433165
Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATAT 53392
||||| | ||| | | |||| | ||||| ||
Sbjct 433166 TTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAG 433221
Query 53393 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 53452
|| || || || ||||| | | || | |||| | || || | ||| ||| |||
Sbjct 433222 GTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAG 433281
Query 53453 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATT 53511
|| |||||||| || | | |||| ||| ||||| || ||| ||| ||| ||
Sbjct 433282 ATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTT 433341
Query 53512 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 53571
|| | || || || || || || ||||| || || | | || ||||| |||||| |
Sbjct 433342 AAA-ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCAT 433400
Query 53572 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631
||||| | |||||||| || | || |||||||| | ||||| | | | || | |||
Sbjct 433401 GTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTT 433460
Query 53632 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAAAT-TGT---CC 53682
| || |||||| ||||| | || ||| ||| | ||| ||| ||
Sbjct 433461 ACGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACC 433520
Query 53683 ATCTATTACAA---AC-ATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT 53738
|||| | ||| || | | | || ||||| ||||||| ||||| || || || || |
Sbjct 433521 ATCTTGTTCAATAAACGAAGGTAAA-GCAATCGATGCCAAGTTACAGACAGCAACTTCGT 433579
Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798
| | | | |||| | || ||| || | || | | ||||| | |||||||
Sbjct 433580 CTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAAT 433639
Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858
| | ||| || ||| ||||||| ||||||||||| | |||||||| ||||||||||
Sbjct 433640 TCTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTT 433699
Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918
| | || | ||| | || | | ||| | ||||||| || | ||| || |
Sbjct 433700 CGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTACC 433757
Query 53919 TCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTC 53976
| ||| ||||| ||| | ||||| |||||||||| || || | |
Sbjct 433758 ACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGC 433817
Query 53977 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036
|||||| ||| ||||| ||| | | ||| | |||||| || | | | |||| ||
Sbjct 433818 CAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTT 433877
Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096
|||||| | ||| || ||||| | ||| |||| |||||| | ||| ||| || ||
Sbjct 433878 CATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 433937
Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156
|| |||||| | | || | ||| | | |||||| ||||| ||||| | ||
Sbjct 433938 ACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATA 433997
Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216
| | | | | || || | ||||| || || ||||| | || | || ||||| ||
Sbjct 433998 CAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTT 434057
Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276
|||| | | ||| || ||||||||||| || | ||| || || || | |||||
Sbjct 434058 GAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGC 434117
Query 54277 TCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAA 54336
||| ||| |||||| ||| ||| | ||| || || || || | || || |||||
Sbjct 434118 ACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAA 434177
Query 54337 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 54396
|| || ||||| || ||||| || || || ||| ||| || |||| || |
Sbjct 434178 AGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAA 434237
Query 54397 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 54456
||||| |||||||| | ||| || ||||||||||| ||||||| | ||
Sbjct 434238 GAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297
Query 54457 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCT----ATATCCC 54512
||||| || ||| || | | || || || || | ||| ||| |||||||
Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCCC 434353
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
| ||| || || | || || | ||| | || || || ||||||||| | | ||
Sbjct 434354 TTCCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTAC 434413
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACC 54615
|| || | ||| || ||| |||| |||||||| |||||
Sbjct 434414 CATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720560987200
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