Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq39 93.3 3e-14 >seq39 Length=58077 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC- 97289 || ||||| |||| ||||||||||| || || || ||||| ||| | ||| | || Sbjct 17296 ACGTAAAATTGACAAAATACATGACATGGAGGTAATGCCATCAATGGGAAATC-AGGAGG 17354 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||| |||| | ||||||| ||| || || || | | | || |||| Sbjct 17355 ATTCCAAGCTGACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTGATTAC 17414 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGC 97409 | | ||||||||||| |||| || || | | | | | ||||||||| || Sbjct 17415 ATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATATTTAGC 17474 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTC 97457 |||||||| ||||||||||| |||||||| ||||| | || ||||| Sbjct 17475 ACCAAAATGTCTCCATTGGAAGCCATAAACTGGTCCCAAATCACCTTC 17522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783408299800