Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq41 131 2e-25 seq54 116 6e-21 >seq41 Length=287713 Score = 131 bits (144), Expect = 2e-25 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || |||||||||||||| || || || || || Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || ||||||||||| |||||||| ||||||||||| || || || ||| Sbjct 13205 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 13146 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| || || ||| || ||| ||| ||| Sbjct 13145 ATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACT 13086 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 || | ||||| || ||||| ||||| ||||| | ||| ||||||||| Sbjct 13085 TCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038 >seq54 Length=356724 Score = 116 bits (128), Expect = 6e-21 Identities = 110/138 (80%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || ||||| || ||||| ||||| ||| || || || || || || Sbjct 21887 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 21829 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| || |||||||| |||||||| ||||||||||| ||||| ||||| Sbjct 21828 TAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 21769 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||||| || ||||| Sbjct 21768 GATTCCTTCCTTGTCTTG 21751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743525098828800