Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq69 304 1e-77
>seq69
Length=709337
Score = 304 bits (336), Expect = 1e-77
Identities = 605/888 (68%), Gaps = 21/888 (2%)
Strand=Plus/Minus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
||||||||| ||| ||||||||||||||||||||| || || || | || ||||| ||
Sbjct 558773 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAAATGTT 558714
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAA 16059
||||||||||||||| ||||| | ||| | ||| ||| | ||||| | |
Sbjct 558713 TTCCATAAAATCAAATGGATTAGTG--ACATT-GTAAACTTTTTTATTACCCAAAGCAAC 558657
Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119
|||||||||||| || |||||||| | ||| || |||||| | ||| ||||| || |
Sbjct 558656 CAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACCCAA 558597
Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179
||| |||| || | || || || || || | |||||| || | ||| |||||| | ||
Sbjct 558596 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 558537
Query 16180 TATATCTCTTACTACACTATTTAACGGAG--GGTTTAA----TAAGTGTTTAAACATTAT 16233
|| |||| | || | ||| ||| ||| || ||| || ||| | ||
Sbjct 558536 AAT---TCTTTCAACGATCTTT---GGATCTGGTCTATGTTGTAAATGAGCAAATAATAA 558483
Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293
||| || |||||| || || |||||||| | || ||||| ||||| || || || |
Sbjct 558482 ACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAA 558423
Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353
|||||||| | |||| ||| || | ||| || |||| |||||||||||| || ||
Sbjct 558422 TCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAA 558363
Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413
||||||||||| || || || |||||||||| |||| | || | | | ||
Sbjct 558362 GATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTG 558303
Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473
|||||| | | ||||||| || || | ||||| ||| | || || |||||
Sbjct 558302 GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCATT 558243
Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533
|||||| | | |||||| ||| || ||||| || || | ||| || |
Sbjct 558242 GAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAACGAGTAAGT 558183
Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593
|||||| ||||| || ||||| || || || || || || || ||||||| | ||
Sbjct 558182 TTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAAT 558123
Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653
||| ||||||| |||| |||| | |||||||| ||||| || |||||| || ||
Sbjct 558122 TTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGCGGC 558063
Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGTTT--TAACCA 16710
||| || || | || | ||||| ||| ||||| | || ||| | |||
Sbjct 558062 AAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCCA 558003
Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770
||| || |||||| |||||||| ||||| | ||||| || ||||| |||||||
Sbjct 558002 ATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCCTT 557943
Query 16771 TTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
|| ||||||| ||| || || | ||| || ||||||| |||||
Sbjct 557942 CTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATA 557895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511190604000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |