Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq39 132 4e-26 >seq39 Length=58077 Score = 132 bits (146), Expect = 4e-26 Identities = 292/430 (68%), Gaps = 7/430 (2%) Strand=Plus/Minus Query 20017 CAATCTCGATATAACTTGAGAAATGAAT--TTCCCTT-ATTAACTACGAAACGGGTATTT 20073 |||| |||| | | ||| |||||| | ||||||| | | ||||| ||||| || ||| Sbjct 17723 CAATTACGATTTGATTTGTCAAATGATTCATTCCCTTTACTCACTACTAAACGAGTGTTT 17664 Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133 | ||||| | || | || | || |||||||| ||||| || || | | || Sbjct 17663 TCCAAAGGTATAATTCACGAACTCTTGTGGTTTATAGCTGGATCTACCGATGCCAA-GAT 17605 Query 20134 CTTGTA-GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGC-AATTTTTACACA 20191 ||| |||||||| || ||||| ||| | |||| ||| | ||||||| ||| Sbjct 17604 TTTGAGTGAAAAAGGGGTCAAGATATGGGAAGGTAATGG-TCTGCGAGAATTTTTGGACA 17546 Query 20192 GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA 20251 | ||||| | |||| || || |||||||| || || ||||| || ||||||| Sbjct 17545 ACTTGGGATTAACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGCTTCCAATGGA 17486 Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311 |||||||||| ||| ||||| || | || | || || |||||| | |||| Sbjct 17485 GACATTTTGGTGCTAAATATCAAGATTGTGATACCGACTACACCGGCCAAGGATTTGATC 17426 Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371 |||||||| |||| || || | | || || || || | || |||||||||| | | Sbjct 17425 AATTACAAGATGTAATCAAGAAATTGAAGACTAATCCGTATGATCGAAGAATTATCATGT 17366 Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431 || ||||| || ||| | || || ||||| || |||||||||||| | | || | Sbjct 17365 CAGCTTGGAATCCTCCTGATTTCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTC 17306 Query 20432 AATTTTACGT 20441 |||||||||| Sbjct 17305 AATTTTACGT 17296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183318892300