Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq39 132 4e-26
>seq39
Length=58077
Score = 132 bits (146), Expect = 4e-26
Identities = 292/430 (68%), Gaps = 7/430 (2%)
Strand=Plus/Minus
Query 20017 CAATCTCGATATAACTTGAGAAATGAAT--TTCCCTT-ATTAACTACGAAACGGGTATTT 20073
|||| |||| | | ||| |||||| | ||||||| | | ||||| ||||| || |||
Sbjct 17723 CAATTACGATTTGATTTGTCAAATGATTCATTCCCTTTACTCACTACTAAACGAGTGTTT 17664
Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133
| ||||| | || | || | || |||||||| ||||| || || | | ||
Sbjct 17663 TCCAAAGGTATAATTCACGAACTCTTGTGGTTTATAGCTGGATCTACCGATGCCAA-GAT 17605
Query 20134 CTTGTA-GAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGC-AATTTTTACACA 20191
||| |||||||| || ||||| ||| | |||| ||| | ||||||| |||
Sbjct 17604 TTTGAGTGAAAAAGGGGTCAAGATATGGGAAGGTAATGG-TCTGCGAGAATTTTTGGACA 17546
Query 20192 GCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA 20251
| ||||| | |||| || || |||||||| || || ||||| || |||||||
Sbjct 17545 ACTTGGGATTAACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGCTTCCAATGGA 17486
Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311
|||||||||| ||| ||||| || | || | || || |||||| | ||||
Sbjct 17485 GACATTTTGGTGCTAAATATCAAGATTGTGATACCGACTACACCGGCCAAGGATTTGATC 17426
Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371
|||||||| |||| || || | | || || || || | || |||||||||| | |
Sbjct 17425 AATTACAAGATGTAATCAAGAAATTGAAGACTAATCCGTATGATCGAAGAATTATCATGT 17366
Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431
|| ||||| || ||| | || || ||||| || |||||||||||| | | || |
Sbjct 17365 CAGCTTGGAATCCTCCTGATTTCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTC 17306
Query 20432 AATTTTACGT 20441
||||||||||
Sbjct 17305 AATTTTACGT 17296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183318892300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |