Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 3e-14 >seq54 Length=356724 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 |||||||||||||| || |||||||||| ||| ||||| |||||||||||||| | | Sbjct 21887 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 21828 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || | | | || |||| |||||| || || || ||||| | ||||| || ||||| Sbjct 21827 AAGGT-TCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 21769 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || |||||||| || || ||||| | | | |||| ||| || Sbjct 21768 GATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAAC 21709 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 |||| || || || || ||||| || || || || || |||||||| ||| || Sbjct 21708 TTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTTGGCT 21654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074525902940