Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq69 315 7e-81
>seq69
Length=709337
Score = 315 bits (348), Expect = 7e-81
Identities = 635/929 (68%), Gaps = 21/929 (2%)
Strand=Plus/Minus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || ||||||||| ||| |||||| ||||||||||| || || || || ||
Sbjct 558784 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCC 558725
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019
| || || ||||||||||||||||||||||| || ||||| | ||||| | | |||
Sbjct 558724 AAGGAAATGTTTTCCATAAAATCAAATGGATTAGT-GACATTGTAAACTTTTTTATTACC 558666
Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079
| | | | ||||||||| |||| || || | ||||||| ||||||| | ||||||
Sbjct 558665 CAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATT 558606
Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139
|||||| | || | || || | || || || ||||||||||| || |||||
Sbjct 558605 CATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGC 558546
Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAA--GGAGGATATTTTAGATGTTTAAAA 14197
|| | ||||| | || || | || || || || || || ||| |||
Sbjct 558545 TTCAGTAATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGAGCAAAT 558488
Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257
| |||||| || |||||| || | || || || | || ||| | |||||| || ||
Sbjct 558487 AATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAA 558428
Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317
||||||||||||||||| |||| ||| || ||||| || || | || ||||| ||
Sbjct 558427 GTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTG 558368
Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTT 14375
|| || || || ||||| ||||| || || | |||| || ||||| |||| |
Sbjct 558367 AAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAA 558308
Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435
| || | |||||| | | ||||| |||| || |||||||| || |||||||
Sbjct 558307 TCTTGG--ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAA 558250
Query 14436 TAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493
||||||| |||||| || ||||| || | |||| ||||| || ||||| | |||
Sbjct 558249 TAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTG--ATGTAAGTTTCAATCAATAA 558192
Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553
|| |||| ||||| ||||||||||| || || || || || ||| || ||||
Sbjct 558191 CGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 558132
Query 14554 TTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14613
||||| ||| || || | |||| |||| |||| ||||||||||| ||||||||
Sbjct 558131 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATC 558072
Query 14614 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT 14673
|| ||||| || ||||| || || |||||| | | || | || | | | |||
Sbjct 558071 GGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTT 558012
Query 14674 TT---TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730
|| ||||||| | ||| ||| | ||| | ||| ||| ||||||| || |||
Sbjct 558011 TTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 557952
Query 14731 AACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790
|||| || || |||||| ||| ||||| | ||| || ||||| | ||| | |
Sbjct 557951 CTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAAC- 557893
Query 14791 TGAAG-ATGTT-TCTTTAAGAATTGGTTC 14817
|| | |||| ||||| | || ||||||
Sbjct 557892 -GACGTGTGTTCTCTTTCAAAAGTGGTTC 557865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344755895200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |