Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq69 315 7e-81 >seq69 Length=709337 Score = 315 bits (348), Expect = 7e-81 Identities = 635/929 (68%), Gaps = 21/929 (2%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || ||||||||| ||| |||||| ||||||||||| || || || || || Sbjct 558784 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCC 558725 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 | || || ||||||||||||||||||||||| || ||||| | ||||| | | ||| Sbjct 558724 AAGGAAATGTTTTCCATAAAATCAAATGGATTAGT-GACATTGTAAACTTTTTTATTACC 558666 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 | | | | ||||||||| |||| || || | ||||||| ||||||| | |||||| Sbjct 558665 CAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATT 558606 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||| | || | || || | || || || ||||||||||| || ||||| Sbjct 558605 CATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGC 558546 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAA--GGAGGATATTTTAGATGTTTAAAA 14197 || | ||||| | || || | || || || || || || ||| ||| Sbjct 558545 TTCAGTAATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGAGCAAAT 558488 Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257 | |||||| || |||||| || | || || || | || ||| | |||||| || || Sbjct 558487 AATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAA 558428 Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317 ||||||||||||||||| |||| ||| || ||||| || || | || ||||| || Sbjct 558427 GTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTG 558368 Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTT 14375 || || || || ||||| ||||| || || | |||| || ||||| |||| | Sbjct 558367 AAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAA 558308 Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 | || | |||||| | | ||||| |||| || |||||||| || ||||||| Sbjct 558307 TCTTGG--ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAA 558250 Query 14436 TAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493 ||||||| |||||| || ||||| || | |||| ||||| || ||||| | ||| Sbjct 558249 TAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTG--ATGTAAGTTTCAATCAATAA 558192 Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553 || |||| ||||| ||||||||||| || || || || || ||| || |||| Sbjct 558191 CGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 558132 Query 14554 TTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14613 ||||| ||| || || | |||| |||| |||| ||||||||||| |||||||| Sbjct 558131 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATC 558072 Query 14614 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT 14673 || ||||| || ||||| || || |||||| | | || | || | | | ||| Sbjct 558071 GGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTT 558012 Query 14674 TT---TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730 || ||||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| Sbjct 558011 TTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGC 557952 Query 14731 AACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790 |||| || || |||||| ||| ||||| | ||| || ||||| | ||| | | Sbjct 557951 CTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAAC- 557893 Query 14791 TGAAG-ATGTT-TCTTTAAGAATTGGTTC 14817 || | |||| ||||| | || |||||| Sbjct 557892 -GACGTGTGTTCTCTTTCAAAAGTGGTTC 557865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344755895200