Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq54 111 1e-19
seq41 100 2e-16
>seq54
Length=356724
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||||||||||||||||| | ||| | | |||||||
Sbjct 21869 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCC 21810
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | |||||||||||| || | |||||||| ||
Sbjct 21809 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGG 21750
Query 18237 ATTTGTTGCTTGACCTGTG-CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295
|| | | | || | | || ||| |||||| | ||| ||| | |||||| ||||
Sbjct 21749 ATCT-TGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTT 21691
Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|| || | ||||| || ||||||||||||||
Sbjct 21690 ACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq41
Length=287713
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||||||||| ||||||||||| | | ||| ||| |||||
Sbjct 13247 ACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCT 13188
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | ||||||||| || || | ||||| || ||
Sbjct 13187 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGG 13128
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | || ||| | ||||||| | ||
Sbjct 13127 ATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTA 13068
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| || ||||| || ||||||||||||
Sbjct 13067 CCGGTTAAAGTTTTGACGAAAATTTGCATT 13038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343352744300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |