Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq54 111 1e-19 seq41 100 2e-16 >seq54 Length=356724 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||| ||||||||||||||||||| | ||| | | ||||||| Sbjct 21869 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCC 21810 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | |||||||||||| || | |||||||| || Sbjct 21809 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGG 21750 Query 18237 ATTTGTTGCTTGACCTGTG-CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 || | | | || | | || ||| |||||| | ||| ||| | |||||| |||| Sbjct 21749 ATCT-TGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTT 21691 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || || | ||||| || |||||||||||||| Sbjct 21690 ACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 >seq41 Length=287713 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||||||||| ||||||||||| | | ||| ||| ||||| Sbjct 13247 ACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCT 13188 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | ||||||||| || || | ||||| || || Sbjct 13187 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGG 13128 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| |||||| | || ||| | ||||||| | || Sbjct 13127 ATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTA 13068 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| || ||||| || |||||||||||| Sbjct 13067 CCGGTTAAAGTTTTGACGAAAATTTGCATT 13038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343352744300