Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq69 192 5e-44
seq41 109 5e-19
seq35 102 7e-17
seq54 84.2 2e-11
>seq69
Length=709337
Score = 192 bits (212), Expect = 5e-44
Identities = 420/626 (67%), Gaps = 11/626 (2%)
Strand=Plus/Plus
Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564
|||| |||||||||||| ||||||| | ||| | | |||||||||||| || ||| |
Sbjct 557860 CCGAAGAACCACTTTTGAAAGAGAACACACGTCGTTATGTCATGTTTCCAATCAGATACC 557919
Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624
|| || ||| | |||||||| ||||| || || || || ||||| | |||||| | |
Sbjct 557920 ATGAAATCTGGCAAATGTACAAGAAGGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCG 557979
Query 57625 ACCTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTA 57681
| | ||| ||||| |||||| || | || || ||| | ||||
Sbjct 557980 ATTTAGGTAAAGATCTTCATGATTGGAGAGAAAAATTAAACGATAATGAACGTTTCTTTA 558039
Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741
| | | ||||| || || ||||||||||||||||||||||| || || ||||| |
Sbjct 558040 TCGGAAGAATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGG 558099
Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||||| ||||| ||| | | || || | || || |||||||| ||| |
Sbjct 558100 AAAACTTTTCAGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTA 558159
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861
|| |||||| | || ||||||| || ||| || | || || || ||| | |||| |
Sbjct 558160 TGATGGAAAACATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGG--A 558217
Query 57862 ACGACGAGAAACGTAGAC----TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG 57917
| | |||| | ||| | ||||| || || ||||| || || || |||
Sbjct 558218 TCCAAAAGAA--GCTGACTTTTTATTCAATGCTATTGAAACCATTCCGCAAATTAAAAAG 558275
Query 57918 AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTA 57977
||||| || ||| | |||| |||||| || || ||| ||| || ||||| |
Sbjct 558276 AAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCGAGGCATTGTTTGCTGAGAGATTG 558335
Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037
| || ||||| || || |||||||| || || || ||||| | || || |||
Sbjct 558336 GTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGG 558395
Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097
|||||||| | || ||||||| || | || || |||||| || || | || |||
Sbjct 558396 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 558455
Query 58098 GAGGGTCTCCATACTGATTTTGCGTG 58123
|| ||| | || |||||||| || ||
Sbjct 558456 GAAGGTTTACACACTGATTTCGCATG 558481
Score = 122 bits (134), Expect = 8e-23
Identities = 879/1410 (62%), Gaps = 42/1410 (3%)
Strand=Plus/Plus
Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551
||| ||||| || ||| | ||||| ||| |||||||||| |||| || || | || ||
Sbjct 433011 GTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGA 433070
Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACT 22611
|||||| ||||| || |||| || | |||||||||| || || || | || |||
Sbjct 433071 AGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTG 433130
Query 22612 CTTGAG--CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
|| | |||| ||| ||||| | || | ||| | ||||||||| || |||
Sbjct 433131 TTTCAATTCATC--CCAATCCCATAATTCTGTAGGCTTTC---TGTCCCACAAGTCATAT 433185
Query 22670 TGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATA-TCGC 22728
|| |||| || | || || |||| ||| ||||| || ||||| | | | |
Sbjct 433186 TGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATAAGGACCTTCTTCTTGT 433245
Query 22729 GGCAAGT---TCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTT 22785
| ||| | | | |||| || | || ||| ||| ||||| ||||| |||| |
Sbjct 433246 GCCAATTCAATAGAAGCT----TCAACAGCAGCGTGATAGATAGTTTCGAAAATTTGAAT 433301
Query 22786 GTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGC 22845
||| ||||| || | | ||| | || | | | || ||| || || ||
Sbjct 433302 GTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAAACCATGAAGGCATCAGC 433361
Query 22846 CATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGG 22905
|| ||| || || || | | || |||| || | ||| || || | || || ||
Sbjct 433362 CAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATTTCTCAGCTTCAGG 433421
Query 22906 CAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTAT 22965
| || || ||||| || || |||||||||||| | || |||| ||| || |
Sbjct 433422 GACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGTAACAACTTTGGTAAC 433481
Query 22966 NNNNNNNNNNNNNTCAAAGTCGTA---AACG------CCCGATTGTACAACAAACTTGTT 23016
||||||| ||| | || || |||| ||| ||||
Sbjct 433482 ATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGTTCAATAAACGAAGG 433541
Query 23017 GACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAAT 23076
| || ||||| || | || || || || || |||||| | | ||| || |||||
Sbjct 433542 TAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAAT 433601
Query 23077 TTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT 23136
||| ||| | ||| | | || || | || ||||| | |||||| || ||
Sbjct 433602 TTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTGGTTGGACTTGGTGTT 433661
Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| | |||||| || | |||| | || || || || ||| || | || | ||| |
Sbjct 433662 ACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGA 433721
Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCG-----CACGTACCTGCCTTCTTCCTCGTAC 23251
||||| | ||||| | | | |||| |||| || ||| || ||
Sbjct 433722 GTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACG-ACCTTCC--CTT--TCATAT 433776
Query 23252 TTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC 23311
|||| ||||||| | |||| ||| |||| ||| ||| |||| || || | || |
Sbjct 433777 TTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGCCAATCCTGGAGCTTCATTT 433836
Query 23312 GGACACATGAGACTCCACATTGAGTCATTTT---CAACGCGTCTCATAAAAAGATCCGGT 23368
||| | | | ||||| | | |||||| |||| | ||||||| | ||| ||
Sbjct 433837 GGAGAGAACAATGTCCAC--TCAC-CATTTTGTTCAACTCTCTTCATAAACAAATCTGGG 433893
Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428
||||| | || ||| | || | || | | || || || ||| ||||||| |
Sbjct 433894 ATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTG 433953
Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488
| || | || || || | || ||||| || || || || | ||||| || ||
Sbjct 433954 ATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCT 434013
Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548
|||||||| || || || ||||| || |||||||| ||||||||| | || | | |||
Sbjct 434014 GGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATA 434073
Query 23549 GGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACG 23608
|| | | ||| || || | ||| | || || | | | ||| | | |||| |
Sbjct 434074 GGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATG 434133
Query 23609 TTGTGAACGTGGAAACCTATGCCTCC-GCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667
|| |||| ||| ||||| || || || || | ||| || || | || || || |
Sbjct 434134 TTATGAATGTGCAAACCAATACCACCAGCACTCTTT-GAAATTAAAGCACAAGTCTTTAA 434192
Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727
|||||| || || || || || || ||||| | || ||||||||||| || |||||
Sbjct 434193 AGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACAT 434252
Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787
||| | ||| || ||| | || || | || | || |||||||||| |
Sbjct 434253 TTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATGGGTAAAGTATCTTTG 434312
Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847
|||||| | || || || || ||| | || ||| ||| ||||||||||| ||
Sbjct 434313 CGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTTCCATGTATACCGATAGC 434372
Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTC 23877
|| | ||| |||| | ||| ||||| ||
Sbjct 434373 AACTCTCATAATCAAATGTTGTGGTCTTTC 434402
>seq41
Length=287713
Score = 109 bits (120), Expect = 5e-19
Identities = 169/240 (70%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 31181 ATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGAC 31240
||| ||||| | |||||||||||||| || ||| | || || || || |||||| | ||
Sbjct 13028 ATTAAATCACA-ATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAA 13086
Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300
|||||| | ||||||| | | || | ||||| | || |||||| ||||| |
Sbjct 13087 GTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATT 13146
Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360
|| || ||||| || | | || || ||||| ||||| || |||||| || ||| |
Sbjct 13147 CCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTA 13206
Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || ||||| ||||||||||| ||| | || |||| | ||| |||| || |||
Sbjct 13207 TCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 13266
>seq35
Length=214301
Score = 102 bits (112), Expect = 7e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 22436 TCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAA 22495
||||||| |||| |||||||||||| |||||||| || | || || ||| |||
Sbjct 165857 TCTTTGATGAGATACTTGTTCACCACTTGGAACTCGCCAGATATTACTCGACGTGTGTAT 165798
Query 22496 ATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCG 22555
| ||||| || ||||||| ||| |||||||| ||||| ||||||| || |||||
Sbjct 165797 AAATTGGACGTATACGGTTCAAAACATTCATTGAATCCCAAAATCTGAGATGTTGAAGCA 165738
Query 22556 GTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCA 22589
|| ||||| || || | || || ||||||||||
Sbjct 165737 GTAGGCATGGGTGCTATCAAGAGTGAGTTTCTCA 165704
>seq54
Length=356724
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || || || || ||||| ||||| | || ||||| |
Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | || ||| | || ||||||||||| | || || ||
Sbjct 21718 TCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGAT 21777
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| ||||| |||||||| | || | ||| ||
Sbjct 21778 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTAC 21837
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||||||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 21838 AACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 21888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765619908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |