Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq69 167 5e-36
seq39 102 2e-16
>seq69
Length=709337
Score = 167 bits (184), Expect = 5e-36
Identities = 309/448 (69%), Gaps = 23/448 (5%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| |||||||| ||||| || |||||| |||| ||||| |||||||||
Sbjct 558336 GTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGG 558395
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| || | || | |||||| || || |||| | | |||
Sbjct 558396 TTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGAC 558455
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT--ACCC 102095
|||||| | || || || ||||| || | | |||| | || ||
Sbjct 558456 GAAGGTTTACACACTGATTTCGCATG-------TTTATTA-----TTTGCTCATTTACAA 558503
Query 102096 CATCAAG-AGA---AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAA 102148
||| | ||| || ||| |||||| || | |||||||| || ||||||| ||
Sbjct 558504 CATAGACCAGATCCAAAGATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAA 558563
Query 102149 GAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGC 102208
||||| | || | | | | || |||| ||| |||| ||||| || || || ||| |
Sbjct 558564 GAATTCTTTACTGATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGT 558623
Query 102209 CAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTA 102267
|| || | |||||||| || |||| | ||||||||| |||| | || ||||| ||
Sbjct 558624 CAATATGTCGAATTTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTT-TA 558682
Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327
||||| || || || || || ||||| || |||||| | | |||||||| ||
Sbjct 558683 CAATGTCACTAATCCATTTGATTTTATGGAAAACATTTCCTTGGCTGGGAAGACCAATTT 558742
Query 102328 TTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
|||||||||||||| | || ||||||
Sbjct 558743 CTTTGAAAAGAGAGTTTCTGATTATCAA 558770
>seq39
Length=58077
Score = 102 bits (112), Expect = 2e-16
Identities = 199/289 (69%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| | | |||||| ||| ||||||||||||| || ||| || |
Sbjct 17582 ATATGGGAAGGTAATGGTCTGCGAGAATTTTTGGACAACTTGGGATTAACTCATCGTCGT 17523
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
|| || ||||||||||| || || || ||||||||| | |||||||||||| ||||| |
Sbjct 17522 GAAGGTGATTTGGGACCAGTTTATGGCTTCCAATGGAGACATTTTGGTGCTAAATATCAA 17463
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512
||| | |||| || || || | || |||||||||| || || | ||||
Sbjct 17462 GATTGTGATACCGACTACACCGGCCAAGGATTTGATCAATTACAAGATGTAATCAAGAAA 17403
Query 35513 CTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571
||| ||| ||||| ||||| |||| || || ||| | || ||||||||| ||| |
Sbjct 17402 TTGA-AGACTAATCCGTATGATCGAAGAATTATCATGTCAGCTTGGAATCCTCCTGAT-T 17345
Query 35572 TCACCTT-ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
|| | || ||||| | |||||||| || | | ||||||||| ||
Sbjct 17344 TCCCATTGATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTACGT 17296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582224933700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |