Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq69 378 7e-100 seq35 84.2 2e-11 >seq69 Length=709337 Score = 378 bits (418), Expect = 7e-100 Identities = 1194/1836 (65%), Gaps = 41/1836 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| ||||||| |||| | || || | || |||||||| ||| ||||| ||||| Sbjct 432628 TCAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCAGTC 432687 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 |||| || ||||||| ||||| |||||||| |||| ||| | ||| || | Sbjct 432688 TTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCC 432747 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | |||| || | | |||||| |||||| || || || | || || | ||||| Sbjct 432748 TTGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATA 432807 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | |||| |||||||| || ||||| || || || || | | ||| || | ||| Sbjct 432808 TCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCG 432867 Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 || | | | ||| ||| || |||||||| | | | | ||| || |||| || || Sbjct 432868 GGGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCA 432927 Query 37087 TTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAA 37146 | ||||| ||| | | | || |||| | || |||||| |||| || || Sbjct 432928 TCGTTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAAT 432987 Query 37147 TCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTA 37206 || |||| || |||||||| | || || || ||| |||||||||| | ||||| Sbjct 432988 TCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTG 433047 Query 37207 TTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTC 37266 |||| || ||||| ||||| || || || |||||||| || | | | |||||| Sbjct 433048 TTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTC 433107 Query 37267 AATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTC 37326 | |||||| | || | | | ||| | ||||| |||||||||||| ||||| || || Sbjct 433108 ATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTT 433167 Query 37327 TTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCA 37386 | ||||| |||||||||| | ||||| ||||| || | | || || ||| Sbjct 433168 CTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCA 433227 Query 37387 TAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTT 37446 ||||| || | || || | ||| | || ||| | || || | ||| || ||| Sbjct 433228 TAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGTT 433287 Query 37447 TCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAAT 37506 ||||||||||| || |||||| | | ||||||| | ||||||| | | || | Sbjct 433288 TCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAAACC 433347 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGAT 37566 || || ||||||||||||| || || || | | || ||||| ||| || | |||||| Sbjct 433348 ATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGAT 433407 Query 37567 CTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACT 37626 | | ||| ||||| |||||||| | ||||| | | | || | || || Sbjct 433408 TTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTT----ACG 433463 Query 37627 AGT----ATTTTCGTAATTATTCT-CAACTTGTCGAA-----------CATAAATACGTT 37670 ||| | ||| |||| || | ||||||||| || | | ||| | Sbjct 433464 AGTAACAACTTTGGTAA-CATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 433522 Query 37671 ATTATT-AACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTT 37729 || || || ||| | || | ||| ||| | | ||||| ||||||||||| ||| Sbjct 433523 CTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCT- 433581 Query 37730 CGTTACTAA--ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATT 37787 | || | ||| | ||| || ||| | || ||| | || | || ||||| Sbjct 433582 -GGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATT 433640 Query 37788 GCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTC 37847 |||| ||||| || | ||||||| ||| ||||| | || | || || || ||| Sbjct 433641 CTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTC 433700 Query 37848 TATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Att 37905 ||||||| || | || || | ||| || || || || | | | | || | Sbjct 433701 GGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACG 433760 Query 37906 tttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCA- 37964 ||| |||| |||| | || || | ||| || | | ||||| | || Sbjct 433761 ACCTTC--CCTTTCATATTTTTCGTACAACTCAACAAACTCGT--CACCATAAGTGTCAG 433816 Query 37965 -TAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023 ||||||||| ||| |||| | | | | ||| || ||| || ||| || | | Sbjct 433817 CCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCT 433876 Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083 |||||| ||||| || | ||| || || | ||||||||| | | ||| |||||| | Sbjct 433877 TCATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCT 433936 Query 38084 TCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATAT 38143 | || |||||||| | | ||||| || |||||| |||||||||||| | || Sbjct 433937 TACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGAT 433996 Query 38144 AAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTAT 38203 | | | | || |||||||| || | ||| || |||| || ||| | | ||||| | Sbjct 433997 ACAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGT 434056 Query 38204 TATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAG 38263 | | | | | |||||| | ||||||||||| | |||||| |||| | ||||||| Sbjct 434057 TGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAG 434116 Query 38264 TACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTA 38323 ||| | | || || ||| || ||| || || ||||| ||| ||||| |||| Sbjct 434117 CACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTA 434176 Query 38324 AAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTA 38383 |||| || ||||| || ||| | |||||||| ||| || || || |||| | | Sbjct 434177 AAGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCA 434236 Query 38384 TAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCAT 38443 |||||| |||||||| || |||||| || || |||||||| |||||| ||| Sbjct 434237 AGAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCAT 434296 Query 38444 GTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCAT-CTATATCACCG 38502 | | || || ||| ||||| | ||||| ||||| || || || | ||||| | Sbjct 434297 GGGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGAC-TCTTGGGATATCCCTT 434355 Query 38503 CCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTA 38562 || || ||||| | || || ||||| | || ||||||||||||||| || |||| | Sbjct 434356 CCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTACCA 434415 Query 38563 TT-CTGTTTAAGTAGATACGATTTTTCTAATGTTTT 38597 || | ||| | ||| ||| ||||||| ||||| Sbjct 434416 TTGATACGTAA-CAAATATGATCTTTCTAAAGTTTT 434450 Score = 280 bits (310), Expect = 1e-70 Identities = 595/881 (68%), Gaps = 18/881 (2%) Strand=Plus/Minus Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 |||||||| ||| ||||| ||| || ||||| ||||| || | | || || | Sbjct 558772 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAAATGTTT 558713 Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458 |||||||| ||| |||||| |||||| | ||||||| | ||| || | ||| Sbjct 558712 TCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAAAGCAACCAAT 558653 Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGA 11518 |||||||| || || ||||| | ||| ||| ||||||| |||||||||||| | | | Sbjct 558652 AATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACCCAATAAA 558593 Query 11519 TCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATC 11578 || || | |||| | || || || || ||||| || | ||| || ||| | || || Sbjct 558592 CTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAATT 558533 Query 11579 GACGTTATAACTTCCTTAGAT--GGTGGATGTAATAAATGTTTAAACATTAAACACGCAA 11636 | || | || || ||| ||| |||| |||||| ||| | |||||| || | Sbjct 558532 --CTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAACATGCGA 558475 Query 11637 AATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCA 11696 ||||| |||||||||||||| | || |||| ||| || || || |||||||| |||| Sbjct 558474 AATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTGGCA 558415 Query 11697 TCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCT 11756 |||| |||| ||| || | ||| || |||| |||||||||||| || || || || | Sbjct 558414 TCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGATACCTT 558355 Query 11757 CCACAGCTGCAAATGCTACTACTCTTTCTCCA---TATACCT-TGTTGCTAGATATCCAT 11812 | ||||| || || || || | ||| || || || ||| | || | |||||| Sbjct 558354 CAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTG-GATCCAT 558296 Query 11813 TTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC---ATTGTTTCTATAGCGTTAAAT 11869 | ||||||||||||| |||||||| | || | || ||||| ||||| || ||| Sbjct 558295 CTGATGGCCCAATCAGCCTTCTTTTTAA---TTTGCGGAATGGTTTCAATAGCATTGAAT 558239 Query 11870 AAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929 ||| |||| | ||| | | || || || || ||||| || ||||| Sbjct 558238 AAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAACGAGTAAGTTTCT 558179 Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989 || ||||| |||||||| ||||| ||||| |||||| || || |||| | || Sbjct 558178 GAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTTGA 558119 Query 11990 ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAA 12049 || || | |||| ||||| | || || ||||| ||||||||||| | ||||| Sbjct 558118 ACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGCGGCAAAG 558059 Query 12050 AATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATC---CCAATCA 12106 || || | || | |||||| | ||| | | ||||||| || ||||||| Sbjct 558058 AAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCCAATCA 557999 Query 12107 TCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTA 12166 | | |||||| |||||| | ||||||| | ||||| || ||| | | | || Sbjct 557998 TGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCCTTCTTG 557939 Query 12167 TACATTTTCCAGATATCATGATACTTAATAGGGAAAATAAC 12207 ||||||| |||||| ||||| || | || || || || || Sbjct 557938 TACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC 557898 >seq35 Length=214301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 324/509 (64%), Gaps = 10/509 (2%) Strand=Plus/Minus Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055 ||||| || || || || || | || ||| || ||||| || | |||||| || Sbjct 164963 GACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATAACCCATAG 164904 Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115 || |||||| | |||| | |||||| || || ||| || || | | | || || Sbjct 164903 AACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGTCA 164844 Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175 || || ||||| ||||| ||||| ||||| || | | ||||||||||||||| | || Sbjct 164843 AAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTCCG 164784 Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235 || || | || ||||| | ||||| || | | | ||||| || |||| ||| | Sbjct 164783 CCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTACCCCACCA 164724 Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAAT 38295 ||| | || || ||| || | | || | |||| ||||| || | Sbjct 164723 GATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTGATATTGTGAATATGGATC 164664 Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || || ||||| | | ||| || || || || || | | || | | | || || Sbjct 164663 CCAATCCCACCAGAAGCTTTGGAAATCAAGGCTGCTTCGTGAAGTGTTTGATAGATTCCA 164604 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || || |||||||| |||| ||| | ||||| | || |||| ||| | || Sbjct 164603 TCAATGGAATCATCCTTCATTGCTAGCAAGAAACA-----AGATGAGAGGTAATTGTATT 164549 Query 38416 -----CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAAT 38470 ||||| || |||| || || |||||||||||| |||| |||| | | Sbjct 164548 CACACCCGGCATTGTATAAAGTTGGCAGTGCATGTATGAAATGCTTTTGTGACATTAACT 164489 Query 38471 TATATGTTTCTATTACATCATCTATATCA 38499 |||||||||| ||| | ||||||||| Sbjct 164488 CATATGTTTCTTCCACAGCTTCTATATCA 164460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523980081600