Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq69 333 3e-86 >seq69 Length=709337 Score = 333 bits (368), Expect = 3e-86 Identities = 621/900 (69%), Gaps = 13/900 (1%) Strand=Plus/Minus Query 35846 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 35905 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| || Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734 Query 35906 TTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttt 35965 || || | || || || |||||||| ||||| |||||||| | ||||| |||| |||| Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674 Query 35966 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATT 36025 ||| ||||| || | |||||||| || |||||||| | |||| ||| | | Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614 Query 36026 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 36085 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554 Query 36086 GAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGT 36145 || || || || ||||| | || | | | | ||| || |||||| Sbjct 558553 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGA 558494 Query 36146 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 36205 ||| | |||||||||||||| ||||| ||| ||||| | || ||||||||||||| Sbjct 558493 GCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 558434 Query 36206 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 36265 || || || | ||| ||||| | || | || || | ||| || || || |||||||| Sbjct 558433 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 558374 Query 36266 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGC 36324 ||| || || || ||||| || || || || |||| | |||||| || | | | | Sbjct 558373 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCC 558314 Query 36325 ACTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381 | | || || ||||| || || |||||||| ||||||||||| | || || || Sbjct 558313 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGT 558255 Query 36382 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 36441 || |||||||| || | | ||| ||| || ||| || | || || |||||||| Sbjct 558254 TTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAA 558195 Query 36442 AAGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500 | || | || |||| || ||||||||||| || ||||| |||||||||||| || Sbjct 558194 TA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATT 558136 Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560 |||| || | ||| || ||||| | |||| ||| | || |||||||| || || | Sbjct 558135 TAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATAC 558076 Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTT 36619 | || || ||||| || ||||| | | ||||| | ||| || | || || Sbjct 558075 CATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT-TT 558017 Query 36620 AGTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 | ||| | ||||||||| | ||||||| || ||| | |||||| ||||||| ||| Sbjct 558016 AATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAAT 557957 Query 36677 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || ||||| ||||| || ||||| | |||||| ||||| ||| |||||||| || ||| Sbjct 557956 GAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 557897 Score = 282 bits (312), Expect = 6e-71 Identities = 1172/1843 (64%), Gaps = 46/1843 (2%) Strand=Plus/Plus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| ||||||||||| | ||| || |||| || || | | ||||||||| || || | Sbjct 432629 CAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCAGTCT 432688 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 ||| || ||||||| ||||| |||||||| || | ||| | || || Sbjct 432689 TTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCT 432748 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 ||||| || || | ||||| |||||| ||||||||| |||| || | ||||| | Sbjct 432749 TGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATAT 432808 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 65073 || || |||||| | |||||||| | || || || | | ||||| || || | Sbjct 432809 CGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGG 432868 Query 65074 GAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 65130 | | ||||| | || ||||| ||| | || ||||| ||| |||| || ||| Sbjct 432869 GGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCAT 432928 Query 65131 CATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 65189 | ||||| ||| | || ||| | | | | | |||||||| | ||| ||| Sbjct 432929 CGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAAT 432987 Query 65190 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 65249 || |||| ||| ||||| | | ||| || || || || ||||| | | | ||||| Sbjct 432988 TCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTG 433047 Query 65250 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 65309 || ||||||||||| | || || || || ||||| || |||||||| ||| ||||| Sbjct 433048 TTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTC 433107 Query 65310 AGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTA 65367 | ||| ||||| | | ||| | ||| | ||||||| ||| | || | || Sbjct 433108 ATACC--ATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGCT 433165 Query 65368 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATAT 65423 ||||| | ||| | | |||| | ||||| || Sbjct 433166 TTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAG 433221 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || || || || ||||| | | || | |||| | || || | ||| ||| ||| Sbjct 433222 GTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAG 433281 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATT 65542 || |||||||| || | | |||| ||| ||||| || ||| ||| ||| || Sbjct 433282 ATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTT 433341 Query 65543 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 65602 || | || || || || || || ||||| || || | | || ||||| |||||| | Sbjct 433342 AAA-ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCAT 433400 Query 65603 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 65662 ||||| | |||||||| || | || |||||||| | ||||| | | | || | || Sbjct 433401 GTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTT 433460 Query 65663 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATTAC 65722 | || |||||| ||||| | || ||| ||| | | | | | | |||| Sbjct 433461 ACGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGT-TTAC 433519 Query 65723 AAACATGTTCAAT-------------GCAACAGATGCCAGATTACAAACGGCTACCTCAT 65769 | | |||||||| |||| ||||||| ||||| || || || || | Sbjct 433520 CATCTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGT 433579 Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829 | | | | |||| | || ||| || | || | | ||||| | ||||||| Sbjct 433580 CTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAAT 433639 Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889 | | ||| || ||| ||||||| ||||||||||| | |||||||| |||||||||| Sbjct 433640 TCTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTT 433699 Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 65949 | | |||| ||| | || | | ||| | | ||||||| || | ||| || | Sbjct 433700 CGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTACC 433757 Query 65950 TCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007 | ||| ||||| ||| | ||||| | |||||||| || || | | Sbjct 433758 ACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGC 433817 Query 66008 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067 |||||| ||| ||||| ||| | | ||| | |||||| || | | | |||| || Sbjct 433818 CAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTT 433877 Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 |||||| | ||| || ||||| | ||| ||||||||||| | ||| ||| || || Sbjct 433878 CATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 433937 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || |||||| | | || | ||| | | |||||| ||||| ||||| | || Sbjct 433938 ACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATA 433997 Query 66188 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 66247 | || | | | || || | ||||| || || ||||| | || | || ||||| || Sbjct 433998 CAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTT 434057 Query 66248 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 66307 |||| | | ||| || ||||||||||| || ||||| || || || | ||||| Sbjct 434058 GAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGC 434117 Query 66308 TCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367 ||| | | |||||| ||| ||| | ||| || || || || | || || ||||| Sbjct 434118 ACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAA 434177 Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427 || || ||||| || ||||| || || || ||| ||| || |||| || | Sbjct 434178 AGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAA 434237 Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487 ||||| |||||||| | ||| || ||||||||||| ||||||| | || Sbjct 434238 GAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297 Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCC 66543 ||||| || ||| || | | || || || |||| ||| ||| ||||||| Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCCC 434353 Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603 | ||| || || | || || | ||| | || || || ||||||||| | | || Sbjct 434354 TTCCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTAC 434413 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 || || ||||| || ||| |||| |||||||| ||||| Sbjct 434414 CATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171648197600