Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq69 343 1e-89 >seq69 Length=709337 Score = 343 bits (380), Expect = 1e-89 Identities = 673/983 (68%), Gaps = 30/983 (3%) Strand=Plus/Minus Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13574 |||||||| |||| |||| |||| | || | ||||| || | ||||| Sbjct 558838 TAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTGGCCATAACA 558779 Query 13575 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13634 || ||||||||| ||| |||||| ||||||||||| || || || || ||| || Sbjct 558778 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAA 558719 Query 13635 ATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTC 13693 || ||||||||||||||||||||||| | |||||| | ||||| | | ||| | | Sbjct 558718 ATGTTTTCCATAAAATCAAATGGATT-AGTGACATTGTAAACTTTTTTATTACCCAAAGC 558660 Query 13694 TAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753 | | |||||||||||||| ||| || | ||||||| ||||||| | |||||||||||| Sbjct 558659 AACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACC 558600 Query 13754 TATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTT 13813 | || | || || | || || || ||||||||||| || ||||| || | Sbjct 558599 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 558540 Query 13814 TATAATAATTGTAATAATCTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13871 ||||| || || |||| || || || || || || ||| ||| | |||| Sbjct 558539 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAA 558482 Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || || |||||| || | || || || | || ||| | |||||| || || |||||| Sbjct 558481 CATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 558422 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 ||||||||||| |||| ||| || ||||| || || | |||||||| || || || Sbjct 558421 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 558362 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT--TGTTCG 14049 || || ||||| ||||| || || | |||| || ||||| |||| | | || | Sbjct 558361 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTGG 558302 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 || |||| | | ||||| |||| || |||||||| || ||||||||||||| Sbjct 558301 AT--CCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCAT 558244 Query 14110 TAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167 | |||||| | || ||||| || | ||||| |||| || ||||| | ||| || Sbjct 558243 TGAATAAAAAGTCAGCTTCTTTTGGATCCTTGA--TGTAAGTTTCAATCAATAACGAGTA 558186 Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227 |||| ||||| ||||||||||| || || || || || || || ||||||| | Sbjct 558185 AGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGG 558126 Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 ||| ||||| | |||| |||| |||| ||||||||||| |||||||| || Sbjct 558125 AATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGC 558066 Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344 ||||| || ||||| || || |||||| | | || | || ||| | ||||| | Sbjct 558065 GGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCT 558006 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404 |||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| |||| Sbjct 558005 CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGC 557946 Query 14405 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAG- 14463 || || |||||| ||| ||||| | ||| || ||||| | || || ||| | Sbjct 557945 CTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC--ATAACGACGT 557888 Query 14464 ATGTT-TCTTTAAGAATTGGTTC 14485 |||| ||||| | || |||||| Sbjct 557887 GTGTTCTCTTTCAAAAGTGGTTC 557865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727160476000