Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq69 343 1e-89
>seq69
Length=709337
Score = 343 bits (380), Expect = 1e-89
Identities = 673/983 (68%), Gaps = 30/983 (3%)
Strand=Plus/Minus
Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13574
|||||||| |||| |||| |||| | || | ||||| || | |||||
Sbjct 558838 TAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTGGCCATAACA 558779
Query 13575 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGAT 13634
|| ||||||||| ||| |||||| ||||||||||| || || || || ||| ||
Sbjct 558778 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAA 558719
Query 13635 ATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTC 13693
|| ||||||||||||||||||||||| | |||||| | ||||| | | ||| | |
Sbjct 558718 ATGTTTTCCATAAAATCAAATGGATT-AGTGACATTGTAAACTTTTTTATTACCCAAAGC 558660
Query 13694 TAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13753
| | |||||||||||||| ||| || | ||||||| ||||||| | ||||||||||||
Sbjct 558659 AACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACC 558600
Query 13754 TATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTT 13813
| || | || || | || || || ||||||||||| || ||||| || |
Sbjct 558599 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 558540
Query 13814 TATAATAATTGTAATAATCTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13871
||||| || || |||| || || || || || || ||| ||| | ||||
Sbjct 558539 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAA 558482
Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931
|| || |||||| || | || || || | || ||| | |||||| || || ||||||
Sbjct 558481 CATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 558422
Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991
||||||||||| |||| ||| || ||||| || || | |||||||| || || ||
Sbjct 558421 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 558362
Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT--TGTTCG 14049
|| || ||||| ||||| || || | |||| || ||||| |||| | | || |
Sbjct 558361 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTGG 558302
Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109
|| |||| | | ||||| |||| || |||||||| || |||||||||||||
Sbjct 558301 AT--CCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCAT 558244
Query 14110 TAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167
| |||||| | || ||||| || | ||||| |||| || ||||| | ||| ||
Sbjct 558243 TGAATAAAAAGTCAGCTTCTTTTGGATCCTTGA--TGTAAGTTTCAATCAATAACGAGTA 558186
Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227
|||| ||||| ||||||||||| || || || || || || || ||||||| |
Sbjct 558185 AGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGG 558126
Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287
||| ||||| | |||| |||| |||| ||||||||||| |||||||| ||
Sbjct 558125 AATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGC 558066
Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344
||||| || ||||| || || |||||| | | || | || ||| | ||||| |
Sbjct 558065 GGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCT 558006
Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
|||||| | ||| ||| | ||| | ||| ||| ||||||| || ||| ||||
Sbjct 558005 CCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGC 557946
Query 14405 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAG- 14463
|| || |||||| ||| ||||| | ||| || ||||| | || || ||| |
Sbjct 557945 CTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC--ATAACGACGT 557888
Query 14464 ATGTT-TCTTTAAGAATTGGTTC 14485
|||| ||||| | || ||||||
Sbjct 557887 GTGTTCTCTTTCAAAAGTGGTTC 557865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727160476000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |