Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq69 331 9e-86
>seq69
Length=709337
Score = 331 bits (366), Expect = 9e-86
Identities = 641/940 (68%), Gaps = 22/940 (2%)
Strand=Plus/Minus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAA---------ATAACG 13362
|||||||| |||| |||| |||| | || | ||||| || | |||||
Sbjct 558838 TAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTGGCCATAACA 558779
Query 13363 CCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGAT 13422
|| ||||||||| ||| |||||| |||||||| || || || || || ||| ||
Sbjct 558778 CCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAA 558719
Query 13423 ATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTC 13481
|| |||||||||||||| |||||||| || ||||| | ||||| | | ||| | |
Sbjct 558718 ATGTTTTCCATAAAATCAAATGGATTAGT-GACATTGTAAACTTTTTTATTACCCAAAGC 558660
Query 13482 TAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACC 13541
| |||||||||||||||| ||| || | ||||||| ||||||| | ||||||||||||
Sbjct 558659 AACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACC 558600
Query 13542 TATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTT 13601
| || | || || | || ||| || ||||||||||| || ||||| || |
Sbjct 558599 CAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGT 558540
Query 13602 TATAATAATCTTAATAATGTCATTAGAA--GGAGGATATTTTAGATGTTTAAAAATTAAA 13659
||||| | | || || | || || || || || || ||| ||| | ||||
Sbjct 558539 AATAATTCTTTCAACGATCT--TTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAA 558482
Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719
|| || |||||| || | || || || | || ||| | |||||| || || ||||||
Sbjct 558481 CATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAAT 558422
Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779
||||||||||| |||| ||| || ||||| || || | || ||||| || || ||
Sbjct 558421 CCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAG 558362
Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839
|| || ||||| ||||| || || | | || || ||||| |||| | | |
Sbjct 558361 ATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTGG 558302
Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899
|||||| | | ||||| |||| || |||||||| || ||||| || ||||||
Sbjct 558301 ATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCATTG 558242
Query 13900 AATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 13957
|||||| || ||||| || | ||||| |||| || ||||| | ||| ||
Sbjct 558241 AATAAAAAGTCAGCTTCTTTTGGATCCTTGA--TGTAAGTTTCAATCAATAACGAGTAAG 558184
Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017
|||| ||||| |||||||| || || || || || || ||| || |||||||||
Sbjct 558183 TTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAA 558124
Query 14018 ATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077
||| || || | |||| |||| ||||||||||||||||||||||||| || |
Sbjct 558123 TTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGCGG 558064
Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---TCC 14134
|||| || ||||| || || |||||| | | || | || ||| | ||||| |||
Sbjct 558063 CAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAATTTTTCTCTCC 558004
Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTT 14194
|||| | ||| ||| | ||| | ||| ||| ||||||| || ||| |||| |
Sbjct 558003 AATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCCT 557944
Query 14195 TTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14234
| || |||||| ||| ||||| | ||| || |||||
Sbjct 557943 TCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAA 557904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587962469600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |