Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq69 304 2e-77 >seq69 Length=709337 Score = 304 bits (336), Expect = 2e-77 Identities = 616/902 (68%), Gaps = 17/902 (2%) Strand=Plus/Minus Query 41753 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTC 41812 ||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||| Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734 Query 41813 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 41872 || || |||| || || |||||||| |||||||| ||||| || ||||| |||| |||| Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674 Query 41873 ttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATT 41932 ||| ||||| || | |||||||| || | ||||| | |||| ||| | | Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614 Query 41933 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 41992 | ||||||||| || | | ||||||| | ||| |||||| ||||||| |||||| Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554 Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACT--GTTTCTTCACTC-GGTGGATACAATAAA 42049 || || || || ||||| |||| | | | || || ||| || |||| Sbjct 558553 TCAACAGCTTCAGTAATAAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAA 558497 Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || ||| | |||||||||||||| ||| | ||| || || | || |||||||||| Sbjct 558496 TGAGCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCG 558437 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 ||||| || || | ||| ||||| | || | || || | ||| || ||||| |||||| Sbjct 558436 TTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAAT 558377 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACC 42228 || ||| || ||||| ||||| || || || || |||| | |||||| || | | Sbjct 558376 GAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAAT 558317 Query 42229 GGCACTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 | | | | || || ||||| || || |||||||| ||||||||||| | || || Sbjct 558316 GCCTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAAT 558258 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 ||||| || ||||| || | | ||| ||| || ||| || | || || || || Sbjct 558257 GGTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAAT 558198 Query 42346 CAAAAGACTA-TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 42404 ||| | || | || ||||||| ||||||||||| || || || |||||||||||| Sbjct 558197 CAATA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAG 558139 Query 42405 ATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTA 42464 || | || || | || || ||||| | |||| ||| | || ||||| || || | Sbjct 558138 ATTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAA 558079 Query 42465 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTG 42524 | || || || ||||| || ||||| | | ||||| | ||| | Sbjct 558078 TACCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT 558019 Query 42525 TTAATTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAA 42581 ||||||| | ||||||||| | ||||||| || ||| | |||||| | ||||| | Sbjct 558018 TTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGA 557959 Query 42582 ATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAA 42641 |||| || || ||||| || ||||| | |||||| ||||| ||| ||||| || || | Sbjct 557958 ATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGA 557899 Query 42642 CA 42643 || Sbjct 557898 CA 557897 Score = 268 bits (296), Expect = 1e-66 Identities = 1168/1836 (64%), Gaps = 32/1836 (2%) Strand=Plus/Plus Query 70797 CAAT-GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTT 70855 |||| || || ||||| | || || ||||||| || | | ||||||||| || || | Sbjct 432629 CAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCAGTCT 432688 Query 70856 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCG 70914 ||| || ||||||| ||||| |||||||| || | ||| || | | || || Sbjct 432689 TTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG-TCC 432747 Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974 || ||||| || | || || |||||| ||||||||| |||| || | ||||| Sbjct 432748 TTGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATA 432807 Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 71034 | || || |||||| | |||||||| | || || || | | ||||| || || Sbjct 432808 TCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCG 432867 Query 71035 GGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCT 71091 || | ||||| | || ||||| ||| | || |||||| ||| | || || | Sbjct 432868 GGGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCA 432927 Query 71092 TCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAA 71150 || ||||| ||| | || ||| | | | | | |||||||| | ||| || Sbjct 432928 TCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAA 432986 Query 71151 TTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATT 71210 ||| |||| ||| ||||| | | ||| || || || || ||||| | | ||||| Sbjct 432987 TTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATT 433046 Query 71211 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCT 71270 || ||||||||||| | || || || || ||||| || |||||||| | | ||||| Sbjct 433047 GTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCT 433106 Query 71271 AAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGT 71328 | ||||||| | || | ||| | ||| | ||||||| ||| | || | || Sbjct 433107 CATACCATGT--TTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGC 433164 Query 71329 ACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTA 71388 | || | || ||||||| || || Sbjct 433165 TTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTT 433224 Query 71389 TCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATG 71448 || || || ||||||| || || | |||| | || || | || | | ||| || Sbjct 433225 TCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATA 433284 Query 71449 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATG-GATAATTTAA 71507 ||||||||||| | | || | ||| ||||| || ||| ||| ||| || || Sbjct 433285 GTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAA 433344 Query 71508 GAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATT 71567 | || || || || || || ||||| || || | | || |||||||||||| | || Sbjct 433345 -ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTT 433403 Query 71568 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 71627 ||| | |||||||| || | || |||||||| | ||||| | | | || | || | Sbjct 433404 AGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC- 433462 Query 71628 GACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAAT-----CAAA----TCTCCCAT 71677 || || | ||||| ||||| | | ||| ||| | ||| | | |||| Sbjct 433463 GAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 433522 Query 71678 CTATTACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 71734 || | ||| | ||| || |||| ||||||| ||||| || || || || | | Sbjct 433523 CTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTG 433582 Query 71735 CATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 71794 | | | |||| | ||||||| || | || | | ||||| | |||||||| | Sbjct 433583 GAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCT 433642 Query 71795 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAA 71854 ||| || ||| ||||||| ||||||||||| | || || || ||||||||||| Sbjct 433643 TTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGG 433702 Query 71855 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCT 71914 | |||| ||| | || | | ||| | | ||||||| || | || | || | | Sbjct 433703 TTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTT--TCTACCACG 433760 Query 71915 T--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAA 71972 ||| ||||| |||| | || || | |||||||| || ||| | | || Sbjct 433761 ACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGCCAA 433820 Query 71973 TCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCAT 72032 ||| ||| |||||| ||| | | ||||| |||||| |||| | | |||| ||||| Sbjct 433821 TCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCAT 433880 Query 72033 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 ||| | ||| || ||||| | ||| |||| |||||| | ||| || || || || Sbjct 433881 AAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACC 433940 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 |||||| | | || | ||| | | |||||| ||||| ||||| | || | Sbjct 433941 GTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAA 434000 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 || | | | || || | ||||| || || ||||| | || | || ||||| || | Sbjct 434001 AGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGAA 434060 Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 72272 ||| | | ||| || ||||||||||| || | ||| || || || | ||||| || Sbjct 434061 AACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACC 434120 Query 72273 ACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 72332 | ||| |||||| || ||| | ||| || || || || | || || ||||| || Sbjct 434121 AGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGC 434180 Query 72333 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392 || ||||| || ||||| || || || ||| ||| || |||| || | || Sbjct 434181 ACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAA 434240 Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452 ||| |||||||| | ||| || ||||||||||| ||||||| | || || Sbjct 434241 ACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATGGGT 434300 Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 72512 ||| || ||| |||| | || || || ||||| || | ||||||| | ||| Sbjct 434301 AAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTTCCATG 434360 Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572 ||| || | || || | ||| | || ||| || ||||||||| | | || ||| || Sbjct 434361 TATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTACCATTGAT 434420 Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608 ||||| || ||| |||| |||||||| ||||| Sbjct 434421 ACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138025506400