Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq69 132 7e-26 >seq69 Length=709337 Score = 132 bits (146), Expect = 7e-26 Identities = 387/585 (66%), Gaps = 16/585 (3%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| ||||| || ||||| || ||| |||||||||| |||||| |||| || || | Sbjct 557902 TGTTTCCAATCAGATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAGGCTTCATTCT 557961 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGG-GAGACTCGTTTGACT 125114 |||| | ||||| ||||| | || || || | |||||| |||| || || Sbjct 557962 GGACAGCTGAAGAAATCGATTTAGGTAAAGATCTTCATGATTGGAGAGAAAAATTAAAC- 558020 Query 125115 GAAACTGAGCGAGAGTTTATATCGCAC--ATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172 || | ||| || ||||| || | || ||||| |||||||||| |||||||| | Sbjct 558021 GATAATGAACGTTTCTTTAT--CGGAAGAATCTTGGCTTTCTTTGCCGCATCCGATGGTA 558078 Query 125173 TCGTCAACGACAATCTGTTG--ACACGATTCT-CTCAAGAGTTGACCATTCCAGAGGTGT 125229 | || || || || || || | || ||| || ||| || | |||||||| | Sbjct 558079 TTGTTAATGAAAACTTGGTGGAAAACTTTTCAGCTGAAG--TTCAA-ATTCCAGAAGCTA 558135 Query 125230 CGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACAC 125289 | || |||||||||||||| ||||| || ||| | ||||| |||| ||||| | Sbjct 558136 AATCTTTCTACGGATTCCAAATTATGATGGAAAACATTCACTCAGAAACTTACTCGTTAT 558195 Query 125290 TGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGA 125347 ||||||| | ||||| |||| ||| || | || | | || || || || || Sbjct 558196 TGATTGAAACTTACATCAAGGATC--CAAAAGAAGCTGACTTTTTATTCAATGCTATTGA 558253 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 || | ||| || || |||||| | |||| || | |||||| | || | | Sbjct 558254 AACCATTCCGCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCGA 558313 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | || || || ||| |||| || ||||| || || || || ||||| || || Sbjct 558314 GGCATTGTTTGCTGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGG 558373 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 | ||||| | || || ||| | ||||| | || | ||||| ||| | || | Sbjct 558374 TTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACTTTCTC 558433 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 ||||| || || | ||| ||||| || ||||| ||| || || Sbjct 558434 CAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGATTTCGC 558478 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 ||| |||||||||||||| ||||||| || ||||| || ||| |||| || ||| | || Sbjct 433112 GGTATGAGAAACTCTTTGTTGGTGGCTCCAATGCCAACCGCTTCCACATCACAAATTTTG 433053 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTAC 97877 || || ||||| ||||||||| | ||| || ||||| ||| Sbjct 433052 GGTAACAATGAATGTTTTGAACCATACACTTCGAACATCTAC 433011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057903146400