Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq41 102 5e-17 seq54 98.7 6e-16 >seq41 Length=287713 Score = 102 bits (112), Expect = 5e-17 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||||||||| ||||| || || |||||||| || ||||| ||||| Sbjct 13266 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 13207 Query 33202 CAAATTGAGTTG----GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | ||||| ||| || ||||| || ||| ||| || || | ||| ||||| | Sbjct 13206 TA----GAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTG 13151 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || |||||||| || ||| || || | | ||| |||||| | || Sbjct 13150 GTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATT 13091 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| |||| || || || || || || | |||||| |||||||||||||| Sbjct 13090 CAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCAT 13039 >seq54 Length=356724 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | ||| ||||| ||||| || || || ||||| || ||||| || | Sbjct 21889 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 21830 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 | || | | || |||||||| || ||| ||| || || | ||| || || | | Sbjct 21829 ATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || ||||| || || ||| ||| || | | ||| ||||| | | || Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAA 21710 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | |||| ||| || ||||| |||||||| ||||| |||||||||||||| || Sbjct 21709 CTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777056085720