Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq69 237 1e-57
>seq69
Length=709337
Score = 237 bits (262), Expect = 1e-57
Identities = 573/855 (67%), Gaps = 33/855 (4%)
Strand=Plus/Minus
Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918
||||||||| || |||||| |||||||| || || || || || | || ||||| ||
Sbjct 558773 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAAATGTT 558714
Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAG 12975
|||||||||||| || ||||| | || || ||| ||||||| || || | |
Sbjct 558713 TTCCATAAAATCAAATGGATTAGT-GA--CATTGTAAACTTTTTTATTACCCAAAGCAAC 558657
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
|| ||||| ||||||||||| || | || || |||||| | ||| ||||| || |
Sbjct 558656 CAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACCCAA 558597
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
||| | || || | ||| || || || || | |||||| || ||||| ||||| |||
Sbjct 558596 TAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAAT 558537
Query 13096 TATGTCTCTTATTACGTTCTCT---AATGGAGGATTTGATAGATGCTTAAACATCATACA 13152
|| |||| ||| ||| | ||| || | || ||| ||| | | |||
Sbjct 558536 AAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAACA 558480
Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212
||| |||||| ||| || ||||| || | || |||| ||||| || || |||| ||
Sbjct 558479 TGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCC 558420
Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272
||||| | |||| ||| || | ||| || |||| ||||| ||||| ||||| ||
Sbjct 558419 TGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGAT 558360
Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCTA 13331
|||||||| || || || || | ||| || ||| || || | | | || | |
Sbjct 558359 ACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAAC-AATGCCTCGGAATCTTGGA 558301
Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAA--CGCAGTTCATATTTTCTATTGCGTT 13389
|||| | ||||||| | || || | ||||| || | || |||| || || ||
Sbjct 558300 TCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGG--AATGGTTTCAATAGCATT 558243
Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449
|||||| | | ||| || || || ||||| || |||||||| || |
Sbjct 558242 GAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAACGAGTAAGT 558183
Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509
|||||| ||||| ||||||||| |||||||| || || ||| || |||| |||| |
Sbjct 558182 TTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAAT 558123
Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC 13569
|||||||| | |||| |||| | |||||||| ||||| || || || || ||
Sbjct 558122 TTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGCGGC 558063
Query 13570 aaaaaaaG-CAAGTATGT---GCTTAATAAA--ttttttttCGTTTTCTGACAACTT--- 13620
||| |||| |||| | | | | || ||| || || |||||| || ||
Sbjct 558062 AAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTT------AATTTTTC 558009
Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAAC 13680
| |||||| ||| |||||| |||||| | || ||| | ||||| || ||||| |
Sbjct 558008 TCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTC 557949
Query 13681 AGCCTTCTTATACAT 13695
||||||||| |||||
Sbjct 557948 AGCCTTCTTGTACAT 557934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430981664636280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |