Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq39 154 2e-32 >seq39 Length=58077 Score = 154 bits (170), Expect = 2e-32 Identities = 185/250 (74%), Gaps = 10/250 (4%) Strand=Plus/Plus Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTAT-----ATCAGATG 7063 ||||||||||| |||||||||||||||||||| ||| ||| || ||||| | Sbjct 17299 TAAAATTGACAAAATACATGACATGGAGGTAAT---GCC--ATCAATGGGAAATCAGGAG 17353 Query 7064 GATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAA 7123 |||||||||| | ||| | ||| | || ||||| ||||| || || ||||| | || | Sbjct 17354 GATTCCAAGCTGACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTGATTA 17413 Query 7124 TTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAG 7183 |||||||||||| | || || || || | |||| ||||| | ||| |||| Sbjct 17414 CATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATATTTAG 17473 Query 7184 CTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGAT 7243 | ||||||||||||||||| || ||||||| || || ||||||||||| ||||||| Sbjct 17474 CACCAAAATGTCTCCATTGGAAGCCATAAACTGGTCCCAAATCACCTTCACGACGATGAG 17533 Query 7244 TAAATCCTAA 7253 | ||||| || Sbjct 17534 TTAATCCCAA 17543 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888 ||||||||||| || | ||||||||| ||||| ||||||||||| || || | |||| Sbjct 17056 ATATGATCTAAGTACACATGAGCATCACCTAGGGTATGAATAAACTCTCCACAGTCCATA 17115 Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948 || || | || ||||| | | || | ||||||||| || || | ||| || || ||| Sbjct 17116 TCTACCACATGTGCAATCATCTTGGTAAGTAATGCATAGGATGCAATATTGAATGGGACA 17175 Query 6949 CCTAATCCCATATCTGCTGATCTTTGATA 6977 || |||||||| || |||||||| || Sbjct 17176 CCCAATCCCATGTCACACGATCTTTGGTA 17204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595870957224000