Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq39 154 2e-32
>seq39
Length=58077
Score = 154 bits (170), Expect = 2e-32
Identities = 185/250 (74%), Gaps = 10/250 (4%)
Strand=Plus/Plus
Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTAT-----ATCAGATG 7063
||||||||||| |||||||||||||||||||| ||| ||| || ||||| |
Sbjct 17299 TAAAATTGACAAAATACATGACATGGAGGTAAT---GCC--ATCAATGGGAAATCAGGAG 17353
Query 7064 GATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAA 7123
|||||||||| | ||| | ||| | || ||||| ||||| || || ||||| | || |
Sbjct 17354 GATTCCAAGCTGACATGATAATTCTTCGATCATACGGATTAGTCTTCAATTTCTTGATTA 17413
Query 7124 TTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAG 7183
|||||||||||| | || || || || | |||| ||||| | ||| ||||
Sbjct 17414 CATCTTGTAATTGATCAAATCCTTGGCCGGTGTAGTCGGTATCACAATCTTGATATTTAG 17473
Query 7184 CTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGAT 7243
| ||||||||||||||||| || ||||||| || || ||||||||||| |||||||
Sbjct 17474 CACCAAAATGTCTCCATTGGAAGCCATAAACTGGTCCCAAATCACCTTCACGACGATGAG 17533
Query 7244 TAAATCCTAA 7253
| ||||| ||
Sbjct 17534 TTAATCCCAA 17543
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888
||||||||||| || | ||||||||| ||||| ||||||||||| || || | ||||
Sbjct 17056 ATATGATCTAAGTACACATGAGCATCACCTAGGGTATGAATAAACTCTCCACAGTCCATA 17115
Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948
|| || | || ||||| | | || | ||||||||| || || | ||| || || |||
Sbjct 17116 TCTACCACATGTGCAATCATCTTGGTAAGTAATGCATAGGATGCAATATTGAATGGGACA 17175
Query 6949 CCTAATCCCATATCTGCTGATCTTTGATA 6977
|| |||||||| || |||||||| ||
Sbjct 17176 CCCAATCCCATGTCACACGATCTTTGGTA 17204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595870957224000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |