Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq69 298 6e-76
>seq69
Length=709337
Score = 298 bits (330), Expect = 6e-76
Identities = 643/957 (67%), Gaps = 30/957 (3%)
Strand=Plus/Minus
Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt---------GAC 21172
|| ||||||||||| |||| |||| ||| | || | ||||| ||| | |
Sbjct 558844 TTCATTTAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTGGCC 558785
Query 21173 ATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCC 21232
|||| || ||||||||||||| |||||| ||||| || ||||| ||||| || ||
Sbjct 558784 ATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCC 558725
Query 21233 AATGATATAGATTCCATAAAATCAAATGGATT-TTCAGATT-TAAA-TATTTTATTACAA 21289
|| || || ||||||||||||||||||||| | | ||| |||| | ||||||| |
Sbjct 558724 AAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATT---A 558668
Query 21290 CCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAA 21349
|||| | ||||||||||| || |||||||| | ||||||||||||||||| ||||
Sbjct 558667 CCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAA 558608
Query 21350 TTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACG 21409
|||||||| | || | || || | ||| | || || || |||||| || ||
Sbjct 558607 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 558548
Query 21410 GCTTC---AACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA 21466
||||| || |||| | | | ||| | || | || || ||| || |
Sbjct 558547 GCTTCAGTAATAATTCTTTCAACGATCTT---TGGATCTGGTCTATGTTGTAAATGAGCA 558491
Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526
|| | |||||||| |||||| || |||||||| || | || |||||||| || ||
Sbjct 558490 AATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAG 558431
Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATG--CTC 21584
|| ||||| || ||||| || ||||| || || ||||| || || || ||||||| |
Sbjct 558430 AAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCA 558371
Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644
|||||| || || || ||||| ||||| || ||||| |||| ||| | | | |
Sbjct 558370 CTGAAA--AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCT 558313
Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704
| ||| |||||| | ||||| | ||||| | |||||| ||| || |
Sbjct 558312 CGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTT 558253
Query 21705 CAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764
||||||| || || | | | ||| | | ||| | |||
Sbjct 558252 CAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATG-TAAGTTTCAATCAAT 558194
Query 21765 NACTA-TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823
|| | || |||| || || || ||||| ||| || || |||||||| ||| || |
Sbjct 558193 AACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTA 558134
Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883
|| |||| | |||||| || | |||| || ||||||||||||| || || |||
Sbjct 558133 GCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCA 558074
Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT 21943
|| |||||||| || ||||| || || ||||| | ||||| ||||| |||||
Sbjct 558073 TCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTTTAAT 558014
Query 21944 TTTT---TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTA 22000
|||| ||||||| | |||||| |||||| | |||||||| |||||| || |
Sbjct 558013 TTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAA 557954
Query 22001 GCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA 22057
|| |||||| || ||||| |||||| |||| ||| | |||||||| || |||
Sbjct 557953 GCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACA 557897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899869173600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |