Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq54 129 6e-25 seq41 123 2e-23 >seq54 Length=356724 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 |||||||||| | || || ||||| | || || ||| | ||||| | ||| | || || Sbjct 21657 CAAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTC 21716 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||| || | || ||| ||||| ||||| ||||| || ||||| || Sbjct 21717 ATCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGA 21776 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 |||||||||| | || | | || |||||| | ||||||| |||| | | |||||| Sbjct 21777 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTA 21836 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| ||||| ||| | || ||||| ||||| | ||||| || Sbjct 21837 CAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887 >seq41 Length=287713 Score = 123 bits (136), Expect = 2e-23 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 26755 TTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCG 26814 |||| | || || ||||||| | || || ||||| ||||| || || | |||||| | | Sbjct 13025 TTTATTAAATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGG 13084 Query 26815 AATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGA 26874 || | ||||| |||||| || || | ||||| ||||| ||||||||||| | Sbjct 13085 AAGTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTA 13144 Query 26875 TACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACG 26934 | || || || ||||||||| | || | | || |||||| | ||||| | ||||| Sbjct 13145 TTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTC 13204 Query 26935 TCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAG 26994 | ||||| ||||| ||||||||||||||| | || |||| ||||| | ||||| | Sbjct 13205 TATCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTG 13264 Query 26995 G 26995 | Sbjct 13265 G 13265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661562340800