Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq69 172 1e-37 >seq69 Length=709337 Score = 172 bits (190), Expect = 1e-37 Identities = 650/1009 (64%), Gaps = 32/1009 (3%) Strand=Plus/Minus Query 363574 AATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAGGACGA 363632 |||||||| |||| || ||||| ||||| ||||| |||||| | |||||| || || Sbjct 434276 AATGCTGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAATGAAAGAAGA 434218 Query 363633 TTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGG 363692 ||| || || ||||| | |||||| | |||| ||||||| | ||||| |||| ||| || Sbjct 434217 TTCTATTGAAGGTATTTATGACACTTTAAAGACTTGTGCTTTAATTTCAAAGAGTGCTGG 434158 Query 363693 CGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATTCGCGGCACAG 363751 || |||||| | || || || ||||| | || | ||| ||| || ||| Sbjct 434157 TGGTATTGGTTTGCACATTCATAACATTCGTTC-CACTGGTGCTTATATTGCTGGTACAA 434099 Query 363752 GGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810 || |||| | ||||| | | || ||| ||||||| || |||| ||||| | || Sbjct 434098 ACGG-TACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTAT 434040 Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870 || || || ||||| ||| | ||| || |||||| ||||||| || || || Sbjct 434039 GTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATGGCAC 433980 Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930 ||||| ||||| || ||||| || | || ||| || || || ||| | | || Sbjct 433979 AGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAATCAGAGCT 433920 Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA--- 363987 | ||| | ||| || | ||| | | || ||||||||| | || || | Sbjct 433919 AGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAACAAAAT 433860 Query 363988 GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGT 364047 ||| || ||| || | || | ||| | ||| |||||| | | || | ||| Sbjct 433859 GGTGAG---TGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATGGT 433803 Query 364048 GACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATT 364107 ||||| | ||||| | |||||||| |||||| ||| || | | | || || || Sbjct 433802 GACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCATC 433743 Query 364108 CCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT 364167 || || ||| | |||| ||||| |||| | || | || || || || || | Sbjct 433742 AAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCATTC 433683 Query 364168 ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA----CAAT 364223 |||||||| || ||| | || ||| |||||||||||| || | | |||| ||| Sbjct 433682 ATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCAAA 433623 Query 364224 TCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 || | |||| | ||| || ||| | |||||| | ||||| ||||| ||| || Sbjct 433622 TCTTC----CAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGT 433567 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGT---TTGTAAAAGATGGTA------CTTT 364334 |||||| | || ||||| || | || ||| ||| | ||||||||| ||| Sbjct 433566 CTGTAACTTGGCATCGATTGCTTTACCTTCGTTTATTGAACAAGATGGTAAACACGCTTG 433507 Query 364335 TGACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 || || | | | |||| || ||| | || |||| | || | ||| || Sbjct 433506 GTACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGT 433447 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCC 364451 || |||| ||||||||| ||| | |||||||| ||| ||||| ||| | || | || Sbjct 433446 CATAGACAGGAATTATTACCCAGTCCCTGAAGCTGAGAAATCTAACATGAGACACAGACC 433387 Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGA 364511 |||| | || || || || | ||||| | || ||| | | | || | ||| || Sbjct 433386 AATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCGA 433327 Query 364512 TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560 ||| | || ||| | | |||| | | || || ||||| || ||| Sbjct 433326 TTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTAT 433278 Score = 163 bits (180), Expect = 7e-35 Identities = 481/739 (65%), Gaps = 12/739 (2%) Strand=Plus/Plus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || |||||||| | | || ||||| ||| ||| || | ||| || ||| || || Sbjct 558054 GCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCAGCT 558113 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| ||||| || | || |||||| || | ||||| ||||| ||||| || Sbjct 558114 GAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATT 558173 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 ||| | ||||| || || | || | | | | | | ||| | | ||| Sbjct 558174 CACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCCAAAAGAAGCTGAC 558233 Query 22399 AACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTG 22458 |||||| || ||| ||||||| |||||| || ||||| |||||||| | Sbjct 558234 TTTTTATTCAATGCTATTGAAACCATTCCGCAAATTAAAAAGAAGGCTGATTGGGCCATC 558293 Query 22459 AAATGGATGAACAAT---GAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTT 22515 | |||||| | || || | || || || | | |||| || |||| ||| Sbjct 558294 AGATGGATCCAAGATTCCGAGGCATTGTTTGCTGAGAGATTGGTTGCTTTCGCTGCTGTT 558353 Query 22516 GAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATT 22575 ||||| || || || ||| ||||| | || || ||| | || ||| | | | Sbjct 558354 GAAGGTATCTTTTTCAGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTG 558413 Query 22576 ATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGAT 22635 ||||| || |||| || || || || |||||| | || || || ||| | || || ||| Sbjct 558414 ATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGAT 558473 Query 22636 TTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACTT 22695 || || ||| | ||| | |||| | |||| || || || || | || Sbjct 558474 TTCGCATGTTTATTATTTGC---TCATTTACAACATAGAC---CAGATCCAAAGATCGTT 558527 Query 22696 GATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACCA 22752 || | ||||||| | || |||||| ||||| ||| || || || |||||| Sbjct 558528 GAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTACCA 558587 Query 22753 GTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGAT 22812 || ||| | | ||||| ||| ||| |||| || |||| | |||||||||| ||| Sbjct 558588 GTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCGAATTTGTTGCTGAT 558647 Query 22813 CGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGG 22872 | |||| || | | ||| || ||| ||| || ||| |||||||||||| | Sbjct 558648 AGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTTGATTTT 558707 Query 22873 ATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATAC 22932 |||||| ||||| | | || |||||||||||||| ||||| |||||| ||| || Sbjct 558708 ATGGAAAACATTTCCTTGGCTGGGAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTAT 558767 Query 22933 CAAAAAGCAGGTGTTATGG 22951 |||||||| |||||||||| Sbjct 558768 CAAAAAGCTGGTGTTATGG 558786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351262109480