Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq54 114 1e-20
seq41 107 2e-18
>seq54
Length=356724
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|||||||||| | || || ||||| | || || ||| | || || | ||||| ||| |
Sbjct 21657 CAAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTC 21716
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|||||||| || | || ||| ||||| ||||| ||||| || ||||| ||
Sbjct 21717 ATCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGA 21776
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| ||| |||| | | || || ||| | ||||||| |||| | | ||| ||
Sbjct 21777 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTA 21836
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||||||| ||||| || | || || || || ||||||||||| ||
Sbjct 21837 CAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
>seq41
Length=287713
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043
|| || ||||||| | || || ||||| ||||| || || | || ||| | ||||| ||
Sbjct 13032 AATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGA 13091
Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103
| |||||| || || | ||||| ||||| ||||||||||| || || ||
Sbjct 13092 ATCTTCCGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACC 13151
Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163
|| ||||| ||| |||| | | || || ||| | ||||| | |||| | ||
Sbjct 13152 AGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGA 13211
Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||||||||| | || || ||||| ||||||||||| ||
Sbjct 13212 CTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935266421700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |