Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq54 91.5 1e-13
seq41 84.2 2e-11
>seq54
Length=356724
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| ||||| |||||||| ||||||||||||| | |||| | |
Sbjct 21875 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCA 21816
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| ||||||||||| || ||| | || | | ||||| || ||| | || || |||
Sbjct 21815 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTG 21756
Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898
|| || || | | || || | | | | ||||| | ||| ||||| ||||
Sbjct 21755 TCTTGGATCTTGGAT--TTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGA 21698
Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
||||||| || || || ||||| || ||||| |||||||||
Sbjct 21697 TGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTTG 21657
>seq41
Length=287713
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| |||| || || || ||||| ||||||||||| | | ||| | ||
Sbjct 13253 CTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 13194
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| || |||||||| || ||| | || | | |||||||| || | || ||||||
Sbjct 13193 TCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTG 13134
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | ||| || | | | | ||||||| | || ||||| |||||||
Sbjct 13133 TCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATG 13074
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || ||||| | |||||||| ||||| |||||| ||
Sbjct 13073 GTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGTG 13035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087308818600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |