Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 1e-13 seq41 84.2 2e-11 >seq54 Length=356724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| |||| ||||| |||||||| ||||||||||||| | |||| | | Sbjct 21875 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCA 21816 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||||||||| || ||| | || | | ||||| || ||| | || || ||| Sbjct 21815 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTG 21756 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || | | || || | | | | ||||| | ||| ||||| |||| Sbjct 21755 TCTTGGATCTTGGAT--TTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGA 21698 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 ||||||| || || || ||||| || ||||| ||||||||| Sbjct 21697 TGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTTG 21657 >seq41 Length=287713 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| |||| || || || ||||| ||||||||||| | | ||| | || Sbjct 13253 CTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 13194 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || |||||||| || ||| | || | | |||||||| || | || |||||| Sbjct 13193 TCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTG 13134 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | ||| || | | | | ||||||| | || ||||| ||||||| Sbjct 13133 TCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATG 13074 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| | |||||||| ||||| |||||| || Sbjct 13073 GTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGTG 13035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087308818600