Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq69 329 4e-85
>seq69
Length=709337
Score = 329 bits (364), Expect = 4e-85
Identities = 624/903 (69%), Gaps = 19/903 (2%)
Strand=Plus/Minus
Query 32349 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 32408
||||| | |||||| || |||||| || ||| || | ||||| || ||||| ||
Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734
Query 32409 TTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAttttt 32468
|| || | || || || |||||||| ||||| |||||||| || ||||| |||| ||||
Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674
Query 32469 ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATT 32528
||| ||||| || | |||||||| || |||||||| | |||| ||| | |
Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614
Query 32529 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 32588
| ||||||||| || | | ||||||| | ||| |||||| ||||||| ||||||
Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554
Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACT--GTTTCTTCACTC-GGTGGATACAATAAA 32645
|| || || || ||||| |||| | | | || || ||| || ||||
Sbjct 558553 TCAACAGCTTCAGTAATAAT---TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAA 558497
Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705
|| ||| | |||||||||||||| ||||| ||| ||||| | || ||||||||||
Sbjct 558496 TGAGCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCG 558437
Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765
||||| || || | ||| ||||| | || | || || | ||| || || || ||||||
Sbjct 558436 TTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAAT 558377
Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACC 32824
|| ||| || || || ||||| || || || || |||| | |||||| || | |
Sbjct 558376 GAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAAT 558317
Query 32825 GGCGCTG--TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 32881
| | | | || || ||||| || || |||||||| ||||||||||| | || ||
Sbjct 558316 GCCTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAAT 558258
Query 32882 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 32941
|| || |||||||| || | | ||| ||| || ||| || | || || |||||
Sbjct 558257 GGTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAAT 558198
Query 32942 CAAAAGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGC 33000
||| | || | || |||| || ||||||||||| || ||||| |||||||||||
Sbjct 558197 CAATA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAG 558139
Query 33001 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33060
|| |||| || | ||| || ||||| | |||| ||| | || |||||||| || |
Sbjct 558138 ATTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAA 558079
Query 33061 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA-ATATTTTTCGTCTGGT 33119
| || || || ||||| || ||||| | | ||||| | | || | | ||
Sbjct 558078 TACCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGT 558019
Query 33120 GTTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 33176
||| ||| | ||||||||| | ||||||| || ||| | |||||| |||||||
Sbjct 558018 -TTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 557960
Query 33177 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 33236
||||| ||||| ||||| || ||||| | |||||| ||||| ||| |||||||| ||
Sbjct 557959 AATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 557900
Query 33237 ACA 33239
|||
Sbjct 557899 ACA 557897
Score = 282 bits (312), Expect = 5e-71
Identities = 1172/1843 (64%), Gaps = 46/1843 (2%)
Strand=Plus/Plus
Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904
|||| ||||||||||| | ||| || |||| || || | | ||||||||| || || |
Sbjct 432629 CAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCAGTCT 432688
Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964
||| || ||||||| ||||| |||||||| || | ||| | || ||
Sbjct 432689 TTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGGTCCT 432748
Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024
||||| || || | ||||| |||||| ||||||||| |||| || | ||||| |
Sbjct 432749 TGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCCATAT 432808
Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62084
||||| |||||| | |||||||| | || || || | | ||||| || || |
Sbjct 432809 CGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCATCGG 432868
Query 62085 GAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62141
| | ||||| | || ||||| ||| | || ||||| ||| |||| || |||
Sbjct 432869 GGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATAGCAT 432928
Query 62142 CATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200
| ||||| ||| | || ||| | | | | | |||||||| | ||| |||
Sbjct 432929 CGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTGGAAT 432987
Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260
|| |||| ||| ||||| | | ||| || || || || ||||| | | | |||||
Sbjct 432988 TCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTG 433047
Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320
|| ||||||||||| | || || || || ||||| || |||||||| ||| |||||
Sbjct 433048 TTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTC 433107
Query 62321 AGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTA 62378
| ||| ||||| | | ||| | ||| | ||||||| ||| | || | ||
Sbjct 433108 ATACC--ATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGCT 433165
Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATAT 62434
||||| | ||| | | |||| | ||||| ||
Sbjct 433166 TTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTG----ATCCTTGGTAG 433221
Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494
|| || || || ||||| | | || | |||| | || || | ||| ||| |||
Sbjct 433222 GTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAG 433281
Query 62495 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG-GATAATT 62553
|| |||||||| || | | |||| ||| ||||| || ||| ||| ||| ||
Sbjct 433282 ATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTT 433341
Query 62554 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62613
|| | || || || || || || ||||| || || | | || ||||| |||||| |
Sbjct 433342 AAA-ACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCAT 433400
Query 62614 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62673
||||| | |||||||| || | || |||||||| | ||||| | | | || | ||
Sbjct 433401 GTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTT 433460
Query 62674 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTAC 62733
| || |||||| ||||| | || ||| ||| | | | | | | ||||
Sbjct 433461 ACGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGT-TTAC 433519
Query 62734 AAACATGTTCAAT-------------GCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780
| | |||||||| |||| ||||||| ||||| || || || || |
Sbjct 433520 CATCTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGT 433579
Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840
| | | | |||| | || ||| || | || | | ||||| | |||||||
Sbjct 433580 CTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAAT 433639
Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900
| | ||| || ||| ||||||| ||||||||||| | |||||||| ||||||||||
Sbjct 433640 TCTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTT 433699
Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 62960
| | |||| ||| | || | | ||| | | ||||||| || | ||| || |
Sbjct 433700 CGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTT--TTTCTACC 433757
Query 62961 TCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018
| ||| ||||| ||| | ||||| | |||||||| || || | |
Sbjct 433758 ACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGC 433817
Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078
|| ||| ||| ||||| ||| | | ||| | |||||| || | | | |||| ||
Sbjct 433818 CAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTT 433877
Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138
|||||| | ||| || ||||| | ||| |||| |||||| | ||| ||| || ||
Sbjct 433878 CATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 433937
Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198
|| |||||| | | || | ||| | | |||||| ||||| ||||| | ||
Sbjct 433938 ACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATA 433997
Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258
| || | | | || || | ||||| || || ||||| | || | || ||||| ||
Sbjct 433998 CAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTT 434057
Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318
|||| | | ||| || ||||||||||| || ||||| || || || | |||||
Sbjct 434058 GAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGC 434117
Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378
||| ||| |||||| ||| ||| | ||| || || || || | || || |||||
Sbjct 434118 ACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAA 434177
Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438
|| || ||||| || ||||| || || || ||| ||| || |||| || |
Sbjct 434178 AGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAA 434237
Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498
||||| |||||||| | ||| || ||||||||||| ||||||| | ||
Sbjct 434238 GAAACAAGATGACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297
Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT----ATATCCC 63554
||||| || ||| || | | || || || |||| ||| ||| |||||||
Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAA----TGACTCTTGGGATATCCC 434353
Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614
| ||| || || | || || | ||| | || || || ||||||||| | | ||
Sbjct 434354 TTCCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTAC 434413
Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63657
|| || ||||| || ||| |||| |||||||| |||||
Sbjct 434414 CATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630891144000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |