Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq69 311 1e-79
>seq69
Length=709337
Score = 311 bits (344), Expect = 1e-79
Identities = 632/923 (68%), Gaps = 33/923 (4%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||| || || |||| | |||||||||||||| ||||| || |
Sbjct 558785 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGC 558726
Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC----A 92902
||| || || | ||| || | |||||| || | || ||| |||||| |
Sbjct 558725 CAAGGAAAT-GTTTTCCATAAAATCAAATGGATTAGTGACATTGTAA-ACTTTTTTATTA 558668
Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
|| ||| | ||||||||||||||| |||||||| | || ||| |||| || | |
Sbjct 558667 CC---CAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTA 558611
Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022
|||||||| || | | || || |||| ||| || || ||||| ||||| || ||| ||
Sbjct 558610 CAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCA 558551
Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAA 93079
|| ||||| | || | |||| | | | | | ||||| |||| | ||| | || |
Sbjct 558550 ACAGCTTCAGT-AATAATTCTTTCAA-CGA-TCTTTGGATCTGGTCTATGTTGTAAATGA 558494
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| | ||| || || || || || |||||||||||||| || | || || || |||
Sbjct 558493 GCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 558434
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| ||||| ||||| | || |||| |||||| | ||| || || || ||||| |
Sbjct 558433 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 558374
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC- 93258
||| ||||| |||||||| || || || || || || | | || ||||| |||
Sbjct 558373 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCC 558314
Query 93259 --GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
||||| || ||||||| | | |||||||| || || || ||||| || |
Sbjct 558313 TCGGAATCT-TG--GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATG 558257
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376
||||| ||||| || |||| | || || | | ||| ||||| || || ||
Sbjct 558256 GTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATC 558197
Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436
|| | || || |||| || || | || ||||| ||||||||||||||||||| ||
Sbjct 558196 AATAACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGAT 558137
Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
||||||| | || || ||||| ||||| | || || | |||||||| || |||
Sbjct 558136 TTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATA 558077
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATAT--ATGCTTTATA-AAATGTTTCTCATCATCT 93553
||||||||||| ||||| |||||||| || | | || | ||| || |||| |||
Sbjct 558076 CCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGT---TCATTATCG 558020
Query 93554 TTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAA 93610
|| | || || |||||| |||||||| | ||||| |||||| | |||||
Sbjct 558019 TTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 557960
Query 93611 AACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670
|| || || || || || |||||||| | ||| || || || ||| |||||||| |||
Sbjct 557959 AATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 557900
Query 93671 ACAAAACGATTAGGGTTATCTTT 93693
||| ||||| | ||| |||||
Sbjct 557899 ACATAACGACGTGTGTTCTCTTT 557877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859825493600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |