Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq69 311 1e-79 >seq69 Length=709337 Score = 311 bits (344), Expect = 1e-79 Identities = 632/923 (68%), Gaps = 33/923 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||| || || |||| | |||||||||||||| ||||| || | Sbjct 558785 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGC 558726 Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC----A 92902 ||| || || | ||| || | |||||| || | || ||| |||||| | Sbjct 558725 CAAGGAAAT-GTTTTCCATAAAATCAAATGGATTAGTGACATTGTAA-ACTTTTTTATTA 558668 Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 || ||| | ||||||||||||||| |||||||| | || ||| |||| || | | Sbjct 558667 CC---CAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTA 558611 Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACA 93022 |||||||| || | | || || |||| ||| || || ||||| ||||| || ||| || Sbjct 558610 CAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCA 558551 Query 93023 ACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATAA 93079 || ||||| | || | |||| | | | | | ||||| |||| | ||| | || | Sbjct 558550 ACAGCTTCAGT-AATAATTCTTTCAA-CGA-TCTTTGGATCTGGTCTATGTTGTAAATGA 558494 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | | ||| || || || || || |||||||||||||| || | || || || ||| Sbjct 558493 GCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 558434 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| ||||| ||||| | || |||| |||||| | ||| || || || ||||| | Sbjct 558433 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 558374 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC- 93258 ||| ||||| |||||||| || || || || || || | | || ||||| ||| Sbjct 558373 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCC 558314 Query 93259 --GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 ||||| || ||||||| | | |||||||| || || || ||||| || | Sbjct 558313 TCGGAATCT-TG--GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATG 558257 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| ||||| || |||| | || || | | ||| ||||| || || || Sbjct 558256 GTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATC 558197 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 || | || || |||| || || | || ||||| ||||||||||||||||||| || Sbjct 558196 AATAACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGAT 558137 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 ||||||| | || || ||||| ||||| | || || | |||||||| || ||| Sbjct 558136 TTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATA 558077 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATAT--ATGCTTTATA-AAATGTTTCTCATCATCT 93553 ||||||||||| ||||| |||||||| || | | || | ||| || |||| ||| Sbjct 558076 CCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGT---TCATTATCG 558020 Query 93554 TTAAGCTTATC---CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAA 93610 || | || || |||||| |||||||| | ||||| |||||| | ||||| Sbjct 558019 TTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 557960 Query 93611 AACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 || || || || || || |||||||| | ||| || || || ||| |||||||| ||| Sbjct 557959 AATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 557900 Query 93671 ACAAAACGATTAGGGTTATCTTT 93693 ||| ||||| | ||| ||||| Sbjct 557899 ACATAACGACGTGTGTTCTCTTT 557877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859825493600