Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq41 105 6e-18 >seq41 Length=287713 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||||||||| |||||||| | ||||| || ||||| ||| ||||| ||| | Sbjct 13038 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTC 13097 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | | || || || || ||||||||||| |||| || || Sbjct 13098 CGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCA 13157 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | || | ||| || |||||||| ||||| || |||| | | || || || Sbjct 13158 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAA 13217 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| | || || |||||| | || | ||||| Sbjct 13218 CATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039278188000