Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq54 141 8e-29 seq41 141 8e-29 >seq54 Length=356724 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| |||||||| | || |||||||| ||||| | ||||| || | Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| || | ||| || || ||||||||||| || || || || ||| Sbjct 21718 TCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGAT 21777 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || ||||| || || ||| | ||| | ||||| ||| Sbjct 21778 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTAC 21837 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| |||||||| | || || || ||| ||||| | || ||| Sbjct 21838 AACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 21888 >seq41 Length=287713 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||||||||||||||| || |||| | ||||| ||| | || Sbjct 13039 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCC 13098 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||| || ||||||||||| || ||| Sbjct 13099 GACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCAA 13158 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || ||||| ||||| || | || | || || |||||| Sbjct 13159 CAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAAC 13218 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || ||||||||||| || | || || || ||| ||||| | || |||||| Sbjct 13219 ATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTTTT 13269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727283839100