Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq41 172 1e-37
seq54 167 4e-36
>seq41
Length=287713
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || |||||||||||||| || || || || || || || ||
Sbjct 13251 CAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 13192
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| || || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 13191 TTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTC 13132
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || || ||||| | ||||| |||||||||||||||||
Sbjct 13131 CTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGT 13072
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTATA 68473
|| || || | || |||||||| || |||||| || | | |||
Sbjct 13071 CTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGTGATTTAATA 13027
>seq54
Length=356724
Score = 167 bits (184), Expect = 4e-36
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||| ||||| || ||||| | || || |||||
Sbjct 21873 CAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATC 21814
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | ||||||||| || || || || |||||||||||
Sbjct 21813 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTC 21754
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | || || || |||||||| | ||| || |||||||| ||||||||
Sbjct 21753 TTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGT 21694
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||| ||||| ||||| || ||||| || |||||| ||
Sbjct 21693 TTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTTG 21657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620787160800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |