Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq41 131 4e-25
seq54 95.1 3e-14
>seq41
Length=287713
Score = 131 bits (144), Expect = 4e-25
Identities = 160/216 (74%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || ||||| | || || | ||||||||||||||||| || || ||
Sbjct 13230 TTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 13171
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| ||| || |||||||| |||||||| || | || || ||
Sbjct 13170 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATT 13111
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| ||| ||||| ||||| | ||||| ||||| ||||| | ||| |||||
Sbjct 13110 GTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGAC 13051
Query 288462 GAATATCTGCATTATGTTATTCTAATATTTTTAATA 288497
||| || ||||| ||| ||| ||||| || ||||
Sbjct 13050 GAAAATTTGCAT--TGTGATT-TAATAAATTGAATA 13018
>seq54
Length=356724
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| | || | ||| ||||| |||||||| || || ||
Sbjct 21852 TTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAA 21793
Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| | |||||| ||||| ||||||||| || || ||||| || | ||| ||
Sbjct 21792 GATCAATCTTTGTTGA---TCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGATTTAAC 21736
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || || | || || || ||||| | ||||| || || || || || || ||
Sbjct 21735 ATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTT 21676
Query 288459 GACGAATATCTGCATTATG 288477
||||| || |||||| ||
Sbjct 21675 AACGAAAATTTGCATTTTG 21657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652283994920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |