Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq41 131 4e-25 seq54 95.1 3e-14 >seq41 Length=287713 Score = 131 bits (144), Expect = 4e-25 Identities = 160/216 (74%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | || || | ||||||||||||||||| || || || Sbjct 13230 TTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 13171 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| ||| || |||||||| |||||||| || | || || || Sbjct 13170 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATT 13111 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| ||||| | ||||| ||||| ||||| | ||| ||||| Sbjct 13110 GTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGAC 13051 Query 288462 GAATATCTGCATTATGTTATTCTAATATTTTTAATA 288497 ||| || ||||| ||| ||| ||||| || |||| Sbjct 13050 GAAAATTTGCAT--TGTGATT-TAATAAATTGAATA 13018 >seq54 Length=356724 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| | || | ||| ||||| |||||||| || || || Sbjct 21852 TTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAA 21793 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | |||||| ||||| ||||||||| || || ||||| || | ||| || Sbjct 21792 GATCAATCTTTGTTGA---TCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGATTTAAC 21736 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || || ||||| | ||||| || || || || || || || Sbjct 21735 ATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTT 21676 Query 288459 GACGAATATCTGCATTATG 288477 ||||| || |||||| || Sbjct 21675 AACGAAAATTTGCATTTTG 21657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652283994920