Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq41 150 1e-31 seq54 116 3e-21 >seq41 Length=287713 Score = 150 bits (166), Expect = 1e-31 Identities = 181/244 (74%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | ||||| |||||||| |||||||| || Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| |||||||||||||||| ||||| | ||||| | |||||||| |||| Sbjct 13205 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 13146 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || || || ||| | || ||||| ||| | ||| || Sbjct 13145 ATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACT 13086 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA---AATA 15186 || ||||| ||||| ||||| || | |||||| || ||||||||||| | ||| |||| Sbjct 13085 TCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCAT-TGTGATTTAATA 13027 Query 15187 AATT 15190 |||| Sbjct 13026 AATT 13023 >seq54 Length=356724 Score = 116 bits (128), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || || ||||| |||||||| ||| | Sbjct 21887 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCG--G 21830 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || |||| | ||||| |||||||| ||||| | ||||| | ||||| || | Sbjct 21829 ATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | |||||||||||||| || ||| ||| ||| | || || || || || | Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAA 21710 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 | || || || ||||||||||| || || ||||| || ||||||||||| || Sbjct 21709 CTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391390199900